RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 NUDT12Q9BQG2 462 aa8.49□□□□□ -1.05
GINS3-205ENST00000564814 DDX25Q9UHL0 483 aaKnown RBP8.49□□□□□ -1.05
GINS3-205ENST00000564814 CPA4Q9UI42 421 aa8.49□□□□□ -1.05
GINS3-205ENST00000564814 CLIC4Q9Y696 253 aa8.49□□□□□ -1.05
GINS3-205ENST00000564814 STK24Q9Y6E0 443 aa8.49□□□□□ -1.05
GINS3-205ENST00000564814 MCM3APO60318 1980 aa8.49□□□□□ -1.05
GINS3-205ENST00000564814 NFASCO94856 1347 aa8.49□□□□□ -1.05
GINS3-205ENST00000564814 LOXHD1Q8IVV2 1947 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 SZT2Q5T011 3432 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 GPR25O00155 361 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 FIBPO43427 364 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 SLC37A4O43826 429 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 PEX10O60683 326 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 CUTAO60888 179 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 COBLO75128 1261 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 RGS20O76081 388 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 TDP2O95551 362 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 OR52Z1P0C646 297 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 ITGB5P18084 799 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 MUTP22033 750 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 LONP1P36776 959 aaKnown RBP8.48□□□□□ -1.05
GINS3-205ENST00000564814 FXR1P51114 621 aaKnown RBP eCLIP8.48□□□□□ -1.05
GINS3-205ENST00000564814 UBE2HP62256 183 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 SPIRE1Q08AE8 756 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 PTGDRQ13258 359 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 PPP2R5CQ13362 524 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 ARHGEF6Q15052 776 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 STXBP2Q15833 593 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 GNPTABQ3T906 1256 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
GINS3-205ENST00000564814 RDM1Q8NG50 284 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 IL31RAQ8NI17 732 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 HAS1Q92839 578 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 SLC5A5Q92911 643 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 MAML3Q96JK9 1138 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 KATNBL1Q9H079 304 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 R3HDMLQ9H3Y0 253 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 VTA1Q9NP79 307 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 LMBRD1Q9NUN5 540 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 FBXO2Q9UK22 296 aaPredicted RBP8.48□□□□□ -1.05
GINS3-205ENST00000564814 CNPY2Q9Y2B0 182 aa8.48□□□□□ -1.05
GINS3-205ENST00000564814 WDR81Q562E7 1941 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 SPATA31C2B4DYI2 1134 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 TNPO2O14787 897 aaKnown RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 PSMD10O75832 226 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 CMA1P23946 247 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 HOXD10P28358 340 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 CTGFP29279 349 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 MCM7P33993 719 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 RGS2P41220 211 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 CNTN2Q02246 1040 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 KIF22Q14807 665 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 STK38Q15208 465 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 CALCRLQ16602 461 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 HYIQ5T013 277 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 NLRX1Q86UT6 975 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 ELOA2Q8IYF1 753 aaPredicted RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 GIMAP8Q8ND71 665 aaPredicted RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 ERO1AQ96HE7 468 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 PGBD1Q96JS3 809 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 PYM1Q9BRP8 204 aaKnown RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 RAB34Q9BZG1 259 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 WDR11Q9BZH6 1224 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 FTOQ9C0B1 505 aaKnown RBP eCLIP8.47□□□□□ -1.05
GINS3-205ENST00000564814 CCSER1Q9C0I3 900 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 TMEM60Q9H2L4 133 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 KCNH7Q9NS40 1196 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 TBC1D22BQ9NU19 505 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 TFIP11Q9UBB9 837 aaKnown RBP8.47□□□□□ -1.05
GINS3-205ENST00000564814 PCDHA7Q9UN72 937 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
GINS3-205ENST00000564814 ZSWIM8A7E2V4 1837 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 IPO5O00410 1097 aaKnown RBP8.46□□□□□ -1.06
GINS3-205ENST00000564814 NKRFO15226 690 aaKnown RBP eCLIP8.46□□□□□ -1.06
GINS3-205ENST00000564814 MSH4O15457 936 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 DHX15O43143 795 aaKnown RBP8.46□□□□□ -1.06
GINS3-205ENST00000564814 FKTNO75072 461 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 ATXN8OSP0DMR3 200 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 KCNA2P16389 499 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 EIF2AK2P19525 551 aaKnown RBP8.46□□□□□ -1.06
GINS3-205ENST00000564814 PSMC4P43686 418 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 NKX3-2P78367 333 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 MTMR1Q13613 665 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 NBR1Q14596 966 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 ZNF174Q15697 407 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 PRR16Q569H4 304 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 RESP18Q5W5W9 173 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 DTHD1Q6ZMT9 781 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 ARMCX2Q7L311 632 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 NPLOC4Q8TAT6 608 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 NEK9Q8TD19 979 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.06
GINS3-205ENST00000564814 TRIM47Q96LD4 638 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms