RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 GIMAP8Q8ND71 665 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-208ENST00000564703 KLHDC9Q8NEP7 349 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 DIS3LQ8TF46 1054 aaKnown RBP18.21■□□□□ 0.51
RAB40C-208ENST00000564703 COPS5Q92905 334 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 MXRA8Q9BRK3 442 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 JADE2Q9NQC1 790 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 GJB4Q9NTQ9 266 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 SMC3Q9UQE7 1217 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 UBIAD1Q9Y5Z9 338 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 KPNA6O60684 536 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 ARIH2O95376 493 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 CYP3A4P08684 503 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 CST5P28325 142 aaPredicted RBP18.2■□□□□ 0.5
RAB40C-208ENST00000564703 USP11P51784 963 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 ACLYP53396 1101 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 BEX3Q00994 111 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 CEP55Q53EZ4 464 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 DPF3Q92784 378 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 FERMT2Q96AC1 680 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 GLT1D1Q96MS3 346 aa18.2■□□□□ 0.5
RAB40C-208ENST00000564703 ADAMTS3O15072 1205 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 GGPS1O95749 300 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 MMP1P03956 469 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 ASGR1P07306 291 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 ITGB5P18084 799 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-208ENST00000564703 NKX3-2P78367 333 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 GNL2Q13823 731 aaKnown RBP18.19■□□□□ 0.5
RAB40C-208ENST00000564703 CELF3Q5SZQ8 465 aaKnown RBP18.19■□□□□ 0.5
RAB40C-208ENST00000564703 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 TBCKQ8TEA7 893 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 SENP7Q9BQF6 1050 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 PHF24Q9UPV7 400 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 CENPFP49454 3210 aa18.19■□□□□ 0.5
RAB40C-208ENST00000564703 K7ELQ4 463 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-208ENST00000564703 MEIS1O00470 390 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 CABYRO75952 493 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 NIPA1Q7RTP0 329 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 UBE2Q1Q7Z7E8 422 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 SNX21Q969T3 373 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 SPATA33Q96N06 139 aa18.18■□□□□ 0.5
RAB40C-208ENST00000564703 MYH7BA7E2Y1 1941 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 MYADML2A6NDP7 307 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 A6NJR5 290 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 M0R2N6 131 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 NOP56O00567 594 aaKnown RBP18.17■□□□□ 0.5
RAB40C-208ENST00000564703 SORBS3O60504 671 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 MYL3P08590 195 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 COL6A1P12109 1028 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 PTGS1P23219 599 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 GJB2P29033 226 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
RAB40C-208ENST00000564703 SP2Q02086 613 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 GUCY1B3Q02153 619 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 ARHGAP1Q07960 439 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 NPY5RQ15761 445 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 DGKDQ16760 1214 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 MYSM1Q5VVJ2 828 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 CCSAPQ6IQ19 270 aaPredicted RBP18.17■□□□□ 0.5
RAB40C-208ENST00000564703 PIK3AP1Q6ZUJ8 805 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 CYFIP1Q7L576 1253 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 DIS3L2Q8IYB7 885 aaKnown RBP18.17■□□□□ 0.5
RAB40C-208ENST00000564703 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 AFG1LQ8WV93 481 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 NAP1L4Q99733 375 aaKnown RBP18.17■□□□□ 0.5
RAB40C-208ENST00000564703 SDF4Q9BRK5 362 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 STARD7Q9NQZ5 370 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 KCNH7Q9NS40 1196 aa18.17■□□□□ 0.5
RAB40C-208ENST00000564703 FRMPD3Q5JV73 1810 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 A0A1W2PQ45 241 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-208ENST00000564703 A0A1W2PQY0 241 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 BTBD18B2RXH4 712 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 H3BQV1 296 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 PPFIA4O75335 1185 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
RAB40C-208ENST00000564703 UBA1P22314 1058 aaKnown RBP18.16■□□□□ 0.5
RAB40C-208ENST00000564703 CIITAP33076 1130 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-208ENST00000564703 CUL4AQ13619 759 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 INF2Q27J81 1249 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 PRR16Q569H4 304 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 METTL7BQ6UX53 244 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 CXCL17Q6UXB2 119 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 SLC39A5Q6ZMH5 540 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 PPTC7Q8NI37 304 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 CYP2W1Q8TAV3 490 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 EMID1Q96A84 441 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-208ENST00000564703 PKD2L1Q9P0L9 805 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 ELP1O95163 1332 aa18.16■□□□□ 0.5
RAB40C-208ENST00000564703 LRRC37A2A6NM11 1700 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 FAM86B1E9PN63 330 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 CTAGE5O15320 804 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 EVI5O60447 810 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 FAM86B2P0C5J1 330 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 ARP10275 920 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 SETQ01105 290 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-208ENST00000564703 SEMA3FQ13275 785 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms