RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 HAS3O00219 553 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 PIK3CDO00329 1044 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 SLC27A2O14975 620 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 ICAM3P32942 547 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 CHMP4BP1P59074 171 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 MFSD10Q14728 455 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 KIAA0753Q2KHM9 967 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 GDF6Q6KF10 455 aaPredicted RBP17.32■□□□□ 0.36
SPG7-210ENST00000564409 DEFB128Q7Z7B8 93 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 SPATA33Q96N06 139 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 SLC9A7Q96T83 725 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 A0A0C4DFX4 3053 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 SH2B2O14492 632 aaPredicted RBP17.31■□□□□ 0.36
SPG7-210ENST00000564409 GGPS1O95749 300 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 SELPP16109 830 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 PTK7Q13308 1070 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 NEDD9Q14511 834 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 IL31RAQ8NI17 732 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
SPG7-210ENST00000564409 CTAGE1Q96RT6 745 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPG7-210ENST00000564409 MLXIPQ9HAP2 919 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 HDAC6Q9UBN7 1215 aa17.31■□□□□ 0.36
SPG7-210ENST00000564409 UBA1P22314 1058 aaKnown RBP17.3■□□□□ 0.36
SPG7-210ENST00000564409 HSDL1Q3SXM5 330 aa17.3■□□□□ 0.36
SPG7-210ENST00000564409 SGMS1Q86VZ5 419 aa17.3■□□□□ 0.36
SPG7-210ENST00000564409 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
SPG7-210ENST00000564409 NKX2-4Q9H2Z4 354 aa17.3■□□□□ 0.36
SPG7-210ENST00000564409 SLC12A7Q9Y666 1083 aa17.3■□□□□ 0.36
SPG7-210ENST00000564409 KAT6AQ92794 2004 aa17.3■□□□□ 0.36
SPG7-210ENST00000564409 SPATA31C2B4DYI2 1134 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 FIBPO43427 364 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 ZNF286BP0CG31 522 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 LRRC8DQ7L1W4 858 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 GIMAP8Q8ND71 665 aaPredicted RBP17.29■□□□□ 0.36
SPG7-210ENST00000564409 SENP7Q9BQF6 1050 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 USP26Q9BXU7 913 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 PRDM12Q9H4Q4 367 aa17.29■□□□□ 0.36
SPG7-210ENST00000564409 YBX2Q9Y2T7 364 aaKnown RBP17.29■□□□□ 0.36
SPG7-210ENST00000564409 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 NOP56O00567 594 aaKnown RBP17.28■□□□□ 0.36
SPG7-210ENST00000564409 EFCAB14O75071 495 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 CXCL10P02778 98 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 CKBP12277 381 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
SPG7-210ENST00000564409 SP2Q02086 613 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 PPP2R2DQ66LE6 453 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 METTL7BQ6UX53 244 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 SRBD1Q8N5C6 995 aaKnown RBP17.28■□□□□ 0.36
SPG7-210ENST00000564409 FANCBQ8NB91 859 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 PPP1R13LQ8WUF5 828 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 C16orf70Q9BSU1 422 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 MYL10Q9BUA6 226 aa17.28■□□□□ 0.36
SPG7-210ENST00000564409 H3BRB1 525 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 MEIS2O14770 477 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 KCNJ6P48051 423 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 TSGA10IPQ3SY00 556 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 CNKSR3Q6P9H4 555 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 NLRX1Q86UT6 975 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
SPG7-210ENST00000564409 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
SPG7-210ENST00000564409 TUT1Q9H6E5 874 aaKnown RBP17.27■□□□□ 0.36
SPG7-210ENST00000564409 PSTPIP2Q9H939 334 aa17.27■□□□□ 0.36
SPG7-210ENST00000564409 CDH23Q9H251 3354 aa17.27■□□□□ 0.35
SPG7-210ENST00000564409 EMSYQ7Z589 1322 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 ABHD14A-ACY1A0A1B0GW23 586 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 RABGGTBP53611 331 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 KRT32Q14532 448 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 HERC6Q8IVU3 1022 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 NEK1Q96PY6 1258 aa17.26■□□□□ 0.35
SPG7-210ENST00000564409 COL25A1Q9BXS0 654 aaPredicted RBP17.26■□□□□ 0.35
SPG7-210ENST00000564409 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
SPG7-210ENST00000564409 DOCK5Q9H7D0 1870 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 MAFGO15525 162 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 CAND2O75155 1236 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 LGALS2P05162 132 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 HMGB1P09429 215 aaKnown RBP17.25■□□□□ 0.35
SPG7-210ENST00000564409 GNAT1P11488 350 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 HOXC8P31273 242 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 TRIM71Q2Q1W2 868 aaKnown RBP17.25■□□□□ 0.35
SPG7-210ENST00000564409 TMTC3Q6ZXV5 915 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 SERINC5Q86VE9 423 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
SPG7-210ENST00000564409 GPRASP2Q96D09 838 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 ZNF215Q9UL58 517 aaPredicted RBP17.25■□□□□ 0.35
SPG7-210ENST00000564409 UNC80Q8N2C7 3258 aa17.25■□□□□ 0.35
SPG7-210ENST00000564409 C17orf102A2RUQ5 167 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 CDC45O75419 566 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 POU3F3P20264 500 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms