RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 ZFP91Q96JP5 570 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 LBHD1Q9BQE6 289 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 UBE2OQ9C0C9 1292 aaKnown RBP9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 POLR3EQ9NVU0 708 aa9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 TBX21Q9UL17 535 aa9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 MRVI1Q9Y6F6 885 aa9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 TRIOBPQ9H2D6 2365 aa9.48□□□□□ -0.89
NSMCE1-207ENST00000564342 SLC34A2O95436 690 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 GH1P01241 217 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 CD4P01730 458 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 MYL3P08590 195 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 CCND2P30279 289 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 EVCP57679 992 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 MRPS9P82933 396 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 ITGA7Q13683 1181 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 HEATR3Q7Z4Q2 680 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 TDHQ8IZJ6 230 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 BADQ92934 168 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 CUL5Q93034 780 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 TM6SF1Q9BZW5 370 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 TMEM39AQ9NV64 488 aa9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
NSMCE1-207ENST00000564342 TLR3O15455 904 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 KPNA6O60684 536 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 MMP3P08254 477 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 RAG1P15918 1043 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 TOB2Q14106 344 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 UBE2SQ16763 222 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 BRDTQ58F21 947 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 KCNV1Q6PIU1 500 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 AFG1LQ8WV93 481 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 INPP4AQ96PE3 977 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 UPF3BQ9BZI7 483 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 PSTPIP2Q9H939 334 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 CYP46A1Q9Y6A2 500 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 V9GY48 417 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 TANC1Q9C0D5 1861 aa9.46□□□□□ -0.9
NSMCE1-207ENST00000564342 CCDC196A0A1B0GTZ2 297 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 hCG_1984214I3L0E3 225 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 STXBP3O00186 592 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 SOX1O00570 391 aaPredicted RBP9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 B4GALT4O60513 344 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 STAM2O75886 525 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 TIMP1P01033 207 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 TGFB3P10600 412 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 UBA1P22314 1058 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 ICAM3P32942 547 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 NAPAP54920 295 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 SP2Q02086 613 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 NTRK3Q16288 839 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 PCNX4Q63HM2 1172 aa9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 ZNF713Q8N859 430 aaPredicted RBP9.45□□□□□ -0.9
NSMCE1-207ENST00000564342 WDR81Q562E7 1941 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 SPDYE3A6NKU9 549 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 SPATA31C2B4DYI2 1134 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 GGPS1O95749 300 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 HOXD8P13378 290 aaPredicted RBP9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 EPHB4P54760 987 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 SHHQ15465 462 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PKN1Q16512 942 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 NBPF20Q3BBV1 942 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 HSDL1Q3SXM5 330 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 LRIT3Q3SXY7 679 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 GNPTABQ3T906 1256 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 C9orf50Q5SZB4 431 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 CELF3Q5SZQ8 465 aaKnown RBP9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 XRRA1Q6P2D8 792 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 NFRKBQ6P4R8 1299 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PPTC7Q8NI37 304 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PPP1R13LQ8WUF5 828 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 KAT2BQ92831 832 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 TRPV6Q9H1D0 765 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 BCAS3Q9H6U6 928 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 RIC8AQ9NPQ8 531 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 BARHL2Q9NY43 387 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 RTEL1Q9NZ71 1219 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PCDHB8Q9UN66 801 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PCDHA6Q9UN73 950 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 PCDHA8Q9Y5H6 950 aa9.44□□□□□ -0.9
NSMCE1-207ENST00000564342 KAT6AQ92794 2004 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms