RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CCSAPQ6IQ19 270 aaPredicted RBP19.02■□□□□ 0.64
RNF40-206ENST00000564260 MXRA8Q9BRK3 442 aa19.02■□□□□ 0.64
RNF40-206ENST00000564260 PHF24Q9UPV7 400 aa19.02■□□□□ 0.64
RNF40-206ENST00000564260 MCM3APO60318 1980 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 CCDC194A0A1B0GVG4 234 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 MEIS1O00470 390 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 C6orf222P0C671 652 aaPredicted RBP19.01■□□□□ 0.63
RNF40-206ENST00000564260 ITGB5P18084 799 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 MNX1P50219 401 aaPredicted RBP19.01■□□□□ 0.63
RNF40-206ENST00000564260 C1orf53Q5VUE5 145 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 KRT40Q6A162 431 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 METTL7BQ6UX53 244 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 HSCBQ8IWL3 235 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 OR6J1Q8NGC5 347 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 PPTC7Q8NI37 304 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 HTATIP2Q9BUP3 242 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 FOXP1Q9H334 677 aaPredicted RBP19.01■□□□□ 0.63
RNF40-206ENST00000564260 C11orf49Q9H6J7 331 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 POLR3EQ9NVU0 708 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 TMEM260Q9NX78 707 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 KCNJ14Q9UNX9 436 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
RNF40-206ENST00000564260 ELP1O95163 1332 aa19■□□□□ 0.63
RNF40-206ENST00000564260 FRMPD3Q5JV73 1810 aa19■□□□□ 0.63
RNF40-206ENST00000564260 CYP3A7-CYP3A51PA0A087WV96 503 aa19■□□□□ 0.63
RNF40-206ENST00000564260 DYNC1LI2O43237 492 aaPredicted RBP19■□□□□ 0.63
RNF40-206ENST00000564260 ARIH2O95376 493 aa19■□□□□ 0.63
RNF40-206ENST00000564260 PGK1P00558 417 aa19■□□□□ 0.63
RNF40-206ENST00000564260 GCFC2P16383 781 aaKnown RBP19■□□□□ 0.63
RNF40-206ENST00000564260 PDCP20941 246 aa19■□□□□ 0.63
RNF40-206ENST00000564260 CYP3A7P24462 503 aa19■□□□□ 0.63
RNF40-206ENST00000564260 ZNF76P36508 570 aa19■□□□□ 0.63
RNF40-206ENST00000564260 GNASQ5JWF2 1037 aa19■□□□□ 0.63
RNF40-206ENST00000564260 CELF3Q5SZQ8 465 aaKnown RBP19■□□□□ 0.63
RNF40-206ENST00000564260 DDX49Q9Y6V7 483 aaKnown RBP19■□□□□ 0.63
RNF40-206ENST00000564260 NFASCO94856 1347 aa19■□□□□ 0.63
RNF40-206ENST00000564260 HOXD8P13378 290 aaPredicted RBP18.99■□□□□ 0.63
RNF40-206ENST00000564260 UBA1P22314 1058 aaKnown RBP18.99■□□□□ 0.63
RNF40-206ENST00000564260 ARHGAP1Q07960 439 aa18.99■□□□□ 0.63
RNF40-206ENST00000564260 MYSM1Q5VVJ2 828 aa18.99■□□□□ 0.63
RNF40-206ENST00000564260 ANO1Q5XXA6 986 aa18.99■□□□□ 0.63
RNF40-206ENST00000564260 PPP4R3AQ6IN85 833 aa18.99■□□□□ 0.63
RNF40-206ENST00000564260 DHX37Q8IY37 1157 aaKnown RBP18.99■□□□□ 0.63
RNF40-206ENST00000564260 DIS3L2Q8IYB7 885 aaKnown RBP18.99■□□□□ 0.63
RNF40-206ENST00000564260 TBCKQ8TEA7 893 aa18.99■□□□□ 0.63
RNF40-206ENST00000564260 KIAA1217Q5T5P2 1943 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 CTAGE5O15320 804 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 PPFIA4O75335 1185 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 ACLYP53396 1101 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 ORC2Q13416 577 aaPredicted RBP18.98■□□□□ 0.63
RNF40-206ENST00000564260 LY6KQ17RY6 165 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 Q4G0T1 1027 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 NEK8Q86SG6 692 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 TNFRSF25Q93038 417 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 PAWRQ96IZ0 340 aaKnown RBP18.98■□□□□ 0.63
RNF40-206ENST00000564260 GLT1D1Q96MS3 346 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 MBOAT7Q96N66 472 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 KCNH7Q9NS40 1196 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 RTEL1Q9NZ71 1219 aa18.98■□□□□ 0.63
RNF40-206ENST00000564260 IGLV3-22A0A075B6J6 115 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 GGPS1O95749 300 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 KCNA2P16389 499 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 GJB2P29033 226 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 SEMA3FQ13275 785 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 SNX17Q15036 470 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 KCNA10Q16322 511 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 DGKDQ16760 1214 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 GJC2Q5T442 439 aaPredicted RBP18.97■□□□□ 0.63
RNF40-206ENST00000564260 RASGRP4Q8TDF6 673 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 LENG1Q96BZ8 264 aaPredicted RBP18.97■□□□□ 0.63
RNF40-206ENST00000564260 PGBD1Q96JS3 809 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 MLXIPQ9HAP2 919 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 TBC1D22BQ9NU19 505 aa18.97■□□□□ 0.63
RNF40-206ENST00000564260 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 ASGR1P07306 291 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 TRAPPC10P48553 1259 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 SDF4Q9BRK5 362 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 KATNAL1Q9BW62 490 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 MROH7Q68CQ1 1323 aa18.96■□□□□ 0.63
RNF40-206ENST00000564260 A0A1W2PQ45 241 aaPredicted RBP18.95■□□□□ 0.62
RNF40-206ENST00000564260 A0A1W2PQY0 241 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 BTBD18B2RXH4 712 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 MMP3P08254 477 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 U2AF2P26368 475 aaKnown RBP eCLIP18.95■□□□□ 0.62
RNF40-206ENST00000564260 SP2Q02086 613 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 PLA2G4DQ86XP0 818 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 SPATA33Q96N06 139 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 RIT2Q99578 217 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 MTG1Q9BT17 334 aaPredicted RBP18.95■□□□□ 0.62
RNF40-206ENST00000564260 AGO4Q9HCK5 861 aaKnown RBP18.95■□□□□ 0.62
RNF40-206ENST00000564260 GJB4Q9NTQ9 266 aa18.95■□□□□ 0.62
RNF40-206ENST00000564260 IPO5O00410 1097 aaKnown RBP18.94■□□□□ 0.62
RNF40-206ENST00000564260 NOP56O00567 594 aaKnown RBP18.94■□□□□ 0.62
RNF40-206ENST00000564260 ADAMTS3O15072 1205 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 TBX3O15119 743 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 PURAQ00577 322 aaKnown RBP18.94■□□□□ 0.62
RNF40-206ENST00000564260 PIK3AP1Q6ZUJ8 805 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 NOSTRINQ8IVI9 506 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 OXER1Q8TDS5 423 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms