RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 BCL6P41182 706 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 RHBDL3P58872 404 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 ST5P78524 1137 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 TERF2Q15554 542 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 ABCB5Q2M3G0 1257 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 MAP9Q49MG5 647 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 ARHGAP27Q6ZUM4 889 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 CERS3Q8IU89 383 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 KRTAP1-3Q8IUG1 177 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 C1orf162Q8NEQ5 155 aaPredicted RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 DLG3Q92796 817 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 MTA3Q9BTC8 594 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 CDADC1Q9BWV3 514 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 LUC7LQ9NQ29 371 aaKnown RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 ZNF180Q9UJW8 692 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 SLC12A8A0AV02 714 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 TRIM75PA6NK02 468 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 IGLV1-40P01703 118 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 RBP3P10745 1247 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 ATF3P18847 181 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 JAM2P57087 298 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 LAPTM5Q13571 262 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 UBE4AQ14139 1066 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 HLA-DQA1Q5Y7H0 255 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 ZPBP2Q6X784 338 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 CISD2Q8N5K1 135 aaKnown RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 FAM181AQ8N9Y4 354 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 SHKBP1Q8TBC3 707 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 JPH3Q8WXH2 748 aaPredicted RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 PMM1Q92871 262 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 AHCYL2Q96HN2 611 aaKnown RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 G6PC3Q9BUM1 346 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 ATG3Q9NT62 314 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 CLDND1Q9NY35 253 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 SPO11Q9Y5K1 396 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 TMEM265A0A087WTH1 108 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 WTIPA6NIX2 430 aaPredicted RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 ZSCAN20P17040 1043 aaPredicted RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 IARSP41252 1262 aaKnown RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 SMAD3P84022 425 aaKnown RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 SMAD2Q15796 467 aaKnown RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 OTOP3Q7RTS5 596 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 RASSF3Q86WH2 238 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 CREG2Q8IUH2 290 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 NOSTRINQ8IVI9 506 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 SH3RF2Q8TEC5 729 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 FAXDC2Q96IV6 333 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 POLR3GLQ9BT43 218 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 BOCQ9BWV1 1114 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 TNFRSF10DQ9UBN6 386 aa3.42□□□□□ -1.86
CHD9-209ENST00000564255 PNMA8BQ9ULN7 279 aaPredicted RBP3.42□□□□□ -1.86
CHD9-209ENST00000564255 H7C1D1 291 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 GSC2O15499 205 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PRPF3O43395 683 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 MYBL2P10244 700 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 LTKP29376 864 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 LSP1P33241 339 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCBP2Q15366 365 aaKnown RBP eCLIP3.41□□□□□ -1.861e-19■■■■■ 48.7
CHD9-209ENST00000564255 PTPN21Q16825 1174 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 GFOD2Q3B7J2 385 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ANGEL2Q5VTE6 544 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 BROXQ5VW32 411 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 FSTL4Q6MZW2 842 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 WAPLQ7Z5K2 1190 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 SLCO6A1Q86UG4 719 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CPA6Q8N4T0 437 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 FBXL6Q8N531 539 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 NETO1Q8TDF5 533 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 DCAF5Q96JK2 942 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 OSBPL1AQ9BXW6 950 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ZNF700Q9H0M5 742 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ARNT2Q9HBZ2 717 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CATSPERZQ9NTU4 200 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 NOB1Q9ULX3 412 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 PRR19A6NJB7 356 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 FADS2P1A8MWK0 482 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CLASP2O75122 1294 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 U2AF1L5P0DN76 240 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 KIR2DL1P43626 348 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 KIR2DL2P43627 348 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 GATA4P43694 442 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 U2AF1Q01081 240 aaKnown RBP eCLIP3.41□□□□□ -1.86
CHD9-209ENST00000564255 EGR3Q06889 387 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CYP4F22Q6NT55 531 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CC2D1AQ6P1N0 951 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 HDGFL2Q7Z4V5 671 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 OSTM1Q86WC4 334 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 RIOX2Q8IUF8 465 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CMTR2Q8IYT2 770 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 PLD6Q8N2A8 252 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 NAT16Q8N8M0 369 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ZNF610Q8N9Z0 462 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PLEKHO2Q8TD55 490 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 JAM3Q9BX67 310 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ZDHHC5Q9C0B5 715 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 EPB41L1Q9H4G0 881 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ANKRD6Q9Y2G4 727 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 WASHC2AQ641Q2 1341 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms