RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 AP3B2Q13367 1082 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 NEDD9Q14511 834 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 DGKDQ16760 1214 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 PPTC7Q8NI37 304 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 AFG1LQ8WV93 481 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 IL17RAQ96F46 866 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
CLK3-213ENST00000563842 ESYT2A0FGR8 921 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 MAFGO15525 162 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 GGPS1O95749 300 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 SUPT20HL2P0C7V6 817 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 GNA11P29992 359 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 PTPN11Q06124 597 aaPredicted RBP15.34■□□□□ 0.05
CLK3-213ENST00000563842 SSRP1Q08945 709 aaKnown RBP15.34■□□□□ 0.05
CLK3-213ENST00000563842 NTRK3Q16288 839 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 UBE2SQ16763 222 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 CELF3Q5SZQ8 465 aaKnown RBP15.34■□□□□ 0.05
CLK3-213ENST00000563842 FAM126BQ8IXS8 530 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 GIMAP8Q8ND71 665 aaPredicted RBP15.34■□□□□ 0.05
CLK3-213ENST00000563842 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 GPRASP2Q96D09 838 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 KATNAL1Q9BW62 490 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 SLC26A6Q9BXS9 759 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 RTEL1Q9NZ71 1219 aa15.34■□□□□ 0.05
CLK3-213ENST00000563842 TRIP12Q14669 1992 aaPredicted RBP15.33■□□□□ 0.05
CLK3-213ENST00000563842 TRIM43BA6NCK2 446 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 PPFIA4O75335 1185 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 CDKL5O76039 1030 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 MYSM1Q5VVJ2 828 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 SH3RF1Q7Z6J0 888 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 PHKBQ93100 1093 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 TRIM43Q96BQ3 446 aaPredicted RBP15.33■□□□□ 0.04
CLK3-213ENST00000563842 SPATA33Q96N06 139 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 ZMYND12Q9H0C1 365 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 NCOA5Q9HCD5 579 aaKnown RBP15.33■□□□□ 0.04
CLK3-213ENST00000563842 SH3GLB2Q9NR46 395 aa15.33■□□□□ 0.04
CLK3-213ENST00000563842 TIMP1P01033 207 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 CD4P01730 458 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 UBA1P22314 1058 aaKnown RBP15.32■□□□□ 0.04
CLK3-213ENST00000563842 PSMC6P62333 389 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 PKN1Q16512 942 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 TDHQ8IZJ6 230 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 FAM177A1Q8N128 213 aaPredicted RBP15.32■□□□□ 0.04
CLK3-213ENST00000563842 BADQ92934 168 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 ZFP91Q96JP5 570 aaPredicted RBP15.32■□□□□ 0.04
CLK3-213ENST00000563842 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
CLK3-213ENST00000563842 TBX21Q9UL17 535 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 GRIN2DO15399 1336 aa15.32■□□□□ 0.04
CLK3-213ENST00000563842 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CLK3-213ENST00000563842 DEXIO95424 95 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
CLK3-213ENST00000563842 SP2Q02086 613 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 STK3Q13188 491 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 NBPF20Q3BBV1 942 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 METTL7BQ6UX53 244 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 ANO3Q9BYT9 981 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 UBIAD1Q9Y5Z9 338 aa15.31■□□□□ 0.04
CLK3-213ENST00000563842 SEC24BO95487 1268 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 HOXD8P13378 290 aaPredicted RBP15.3■□□□□ 0.04
CLK3-213ENST00000563842 NEK4P51957 841 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 AK2P54819 239 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 FPGSQ05932 587 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 MTMR1Q13613 665 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 HSDL1Q3SXM5 330 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 MFSD5Q6N075 450 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 REXO1Q8N1G1 1221 aaKnown RBP15.3■□□□□ 0.04
CLK3-213ENST00000563842 TMEM199Q8N511 208 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 LARP6Q9BRS8 491 aaKnown RBP15.3■□□□□ 0.04
CLK3-213ENST00000563842 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
CLK3-213ENST00000563842 B4GALT4O60513 344 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 PFKFB2O60825 505 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 XBP1P17861 261 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 ZNF76P36508 570 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 SREBF1P36956 1147 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 PSEN2P49810 448 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 NLRP5P59047 1200 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 SEMA3FQ13275 785 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 PPIGQ13427 754 aaKnown RBP eCLIP15.29■□□□□ 0.046e-7■■■□□ 17.1
CLK3-213ENST00000563842 C8orf34Q49A92 452 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 CYFIP1Q7L576 1253 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 SESTD1Q86VW0 696 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 MXRA8Q9BRK3 442 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 TRPV6Q9H1D0 765 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 HIPK3Q9H422 1215 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
CLK3-213ENST00000563842 MYH9P35579 1960 aaKnown RBP15.29■□□□□ 0.04
CLK3-213ENST00000563842 SZT2Q5T011 3432 aa15.28■□□□□ 0.04
CLK3-213ENST00000563842 SORBS3O60504 671 aa15.28■□□□□ 0.04
CLK3-213ENST00000563842 F2P00734 622 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms