RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 TIMP1P01033 207 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 IFNAR1P17181 557 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 ITGB5P18084 799 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 NBPF20Q3BBV1 942 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 HSDL1Q3SXM5 330 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 C9orf50Q5SZB4 431 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 TMEM39AQ9NV64 488 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 UBIAD1Q9Y5Z9 338 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 MRVI1Q9Y6F6 885 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 TET1Q8NFU7 2136 aa17.02■□□□□ 0.31
RPUSD1-204ENST00000563560 UMODL1Q5DID0 1318 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 ESYT2A0FGR8 921 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 F2P00734 622 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 MYL3P08590 195 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 LAMC2Q13753 1193 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 C8orf34Q49A92 452 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 SESTD1Q86VW0 696 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 TRPV6Q9H1D0 765 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
RPUSD1-204ENST00000563560 CCDC196A0A1B0GTZ2 297 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 EDIL3O43854 480 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 GGPS1O95749 300 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 SCG2P13521 617 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 MFSD5Q6N075 450 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 PPP1R13LQ8WUF5 828 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 GBF1Q92538 1859 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 CUL5Q93034 780 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 PHKBQ93100 1093 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 SENP7Q9BQF6 1050 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 C16orf70Q9BSU1 422 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 NOC4LQ9BVI4 516 aaKnown RBP17■□□□□ 0.31
RPUSD1-204ENST00000563560 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
RPUSD1-204ENST00000563560 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 WNT8AQ9H1J5 351 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 TRMT13Q9NUP7 481 aaKnown RBP17■□□□□ 0.31
RPUSD1-204ENST00000563560 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 EYSQ5T1H1 3165 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 PTPRSQ13332 1948 aa17■□□□□ 0.31
RPUSD1-204ENST00000563560 FIBPO43427 364 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 ATP9AO75110 1047 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 KCNA2P16389 499 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 HOXC8P31273 242 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 HIC1Q14526 733 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 SHHQ15465 462 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 VTI1AQ96AJ9 217 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 LRCH3Q96II8 777 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 LARP6Q9BRS8 491 aaKnown RBP16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 CHD7Q9P2D1 2997 aa16.99■□□□□ 0.31
RPUSD1-204ENST00000563560 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 PPFIA4O75335 1185 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 RAG1P15918 1043 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 NAPAP54920 295 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 CCT2P78371 535 aaKnown RBP16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 FGD1P98174 961 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 PTPN11Q06124 597 aaPredicted RBP16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 NPY5RQ15761 445 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 DGKDQ16760 1214 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 METTL7BQ6UX53 244 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 DHX37Q8IY37 1157 aaKnown RBP16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 GPRASP2Q96D09 838 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 LBHD1Q9BQE6 289 aaPredicted RBP16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 SIP14410 1827 aa16.98■□□□□ 0.31
RPUSD1-204ENST00000563560 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 SREBF1P36956 1147 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 ADCY7P51828 1080 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 GNPTABQ3T906 1256 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 CYP2W1Q8TAV3 490 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 SPATA33Q96N06 139 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 KIF2CQ99661 725 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 GPR20Q99678 358 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 ANO3Q9BYT9 981 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 JADE2Q9NQC1 790 aa16.97■□□□□ 0.31
RPUSD1-204ENST00000563560 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 PPFIA3O75145 1194 aa16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 CTDNEP1O95476 244 aa16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 CYP2C18P33260 490 aa16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 FPGSQ05932 587 aa16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 SCRN1Q12765 414 aa16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 AP3B2Q13367 1082 aa16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 GDF6Q6KF10 455 aaPredicted RBP16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 DHX38Q92620 1227 aaKnown RBP16.96■□□□□ 0.31
RPUSD1-204ENST00000563560 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms