RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 FCER1AP12319 257 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
SMG1-208ENST00000563448 NOGQ13253 232 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 CAMK4Q16566 473 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 XRRA1Q6P2D8 792 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 PDILTQ8N807 584 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 SLC5A5Q92911 643 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 CAPNS2Q96L46 248 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 CCSER1Q9C0I3 900 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 NUP62CLQ9H1M0 184 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 LRWD1Q9UFC0 647 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 THSD7BQ9C0I4 1608 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 POLR2DO15514 142 aaKnown RBP11.47□□□□□ -0.57
SMG1-208ENST00000563448 TLR2O60603 784 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 SPIRE1Q08AE8 756 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 LONRF3Q496Y0 759 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 TIGD1Q96MW7 591 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 MMTAG2Q9BU76 263 aaKnown RBP11.47□□□□□ -0.57
SMG1-208ENST00000563448 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 KCNH7Q9NS40 1196 aa11.47□□□□□ -0.57
SMG1-208ENST00000563448 PSMD10O75832 226 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 RGS20O76081 388 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 EDNRBP24530 442 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 CRHR2Q13324 411 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 KARSQ15046 597 aaKnown RBP11.46□□□□□ -0.57
SMG1-208ENST00000563448 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 CABP7Q86V35 215 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 NUDT12Q9BQG2 462 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 ZNF577Q9BSK1 485 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 RAB34Q9BZG1 259 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 AGO4Q9HCK5 861 aaKnown RBP11.46□□□□□ -0.57
SMG1-208ENST00000563448 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
SMG1-208ENST00000563448 SERTAD1Q9UHV2 236 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 VAV3Q9UKW4 847 aa11.46□□□□□ -0.57
SMG1-208ENST00000563448 SYCE3A1L190 88 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 CA12O43570 354 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
SMG1-208ENST00000563448 STRNO43815 780 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 UBA7P41226 1012 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 MTMR1Q13613 665 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 E2F4Q16254 413 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 DHX58Q96C10 678 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 INPP4AQ96PE3 977 aaPredicted RBP11.45□□□□□ -0.58
SMG1-208ENST00000563448 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 IPO5O00410 1097 aaKnown RBP11.45□□□□□ -0.58
SMG1-208ENST00000563448 COBLO75128 1261 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 STAM2O75886 525 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 ADORA2AP29274 412 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 MAPK4P31152 587 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 TXLNAP40222 546 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 STXBP2Q15833 593 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 RBM43Q6ZSC3 357 aaKnown RBP11.45□□□□□ -0.58
SMG1-208ENST00000563448 OTOP1Q7RTM1 612 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 PLEKHH3Q7Z736 793 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 NLRX1Q86UT6 975 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 ABRAQ8N0Z2 381 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 GPRASP2Q96D09 838 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 DISC1Q9NRI5 854 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 PKD2L1Q9P0L9 805 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 MYH11P35749 1972 aa11.45□□□□□ -0.58
SMG1-208ENST00000563448 ARID2Q68CP9 1835 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 DHX15O43143 795 aaKnown RBP11.44□□□□□ -0.58
SMG1-208ENST00000563448 ATP9AO75110 1047 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 EIF3JO75822 258 aaKnown RBP11.44□□□□□ -0.58
SMG1-208ENST00000563448 LETM1O95202 739 aaPredicted RBP11.44□□□□□ -0.58
SMG1-208ENST00000563448 HTRA3P83110 453 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 ITGB3BPQ13352 177 aaPredicted RBP11.44□□□□□ -0.58
SMG1-208ENST00000563448 PPP2R5CQ13362 524 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 GRB14Q14449 540 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 B3GNT9Q6UX72 402 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 CNNM3Q8NE01 707 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 RIT2Q99578 217 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 CCDC39Q9UFE4 941 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 IVNS1ABPQ9Y6Y0 642 aa11.44□□□□□ -0.58
SMG1-208ENST00000563448 EML1O00423 815 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 CTAGE5O15320 804 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 FOXN1O15353 648 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 MAFGO15525 162 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 GAS7O60861 476 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ZNF445P59923 1031 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 PDE4DQ08499 809 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 GRB10Q13322 594 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ECM1Q16610 540 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 NAALADL2Q58DX5 795 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 KRT79Q5XKE5 535 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 PDXDC2PQ6P474 469 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 CKAP2LQ8IYA6 745 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ELOA2Q8IYF1 753 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms