RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CCDC39Q9UFE4 941 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 PPP1R9AQ9ULJ8 1098 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 ZHX2Q9Y6X8 837 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 GCOM1H8Y6P7 765 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 MEIS2O14770 477 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 POLR2DO15514 142 aaKnown RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 SLC26A4O43511 780 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 USP2O75604 605 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 POLR2MP0CAP2 368 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 SREBF1P36956 1147 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 UBA7P41226 1012 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 NR6A1Q15406 480 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 CALCRLQ16602 461 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 UBE2SQ16763 222 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 MSS51Q4VC12 460 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 LDHDQ86WU2 507 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 C4orf32Q8N8J7 132 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 CDCA5Q96FF9 252 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 CCSER1Q9C0I3 900 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 TAF1DQ9H5J8 278 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 RPAP3Q9H6T3 665 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 SLC38A10Q9HBR0 1119 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 TMEM260Q9NX78 707 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 DDX25Q9UHL0 483 aaKnown RBP10.95□□□□□ -0.66
UBFD1-202ENST00000563366 CCPG1Q9ULG6 757 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 RLFQ13129 1914 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 A0A0G2JMZ2 1700 aa10.95□□□□□ -0.66
UBFD1-202ENST00000563366 CYP3A7-CYP3A51PA0A087WV96 503 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 ADM5C9JUS6 153 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 WNT7AO00755 349 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 ADAMTS3O15072 1205 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 TBX3O15119 743 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 MARCH6O60337 910 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 SMC2O95347 1197 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 MYL1P05976 194 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 SLFN14P0C7P3 912 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 XRCC6P12956 609 aaKnown RBP eCLIP10.94□□□□□ -0.66
UBFD1-202ENST00000563366 CYP3A7P24462 503 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 GHRHRQ02643 423 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 PPATQ06203 517 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 SEMA3FQ13275 785 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 VGLL4Q14135 290 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 PDIA5Q14554 519 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 PRAMEF18Q5VWM3 479 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 USP17L6PQ6QN14 398 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 ARMC9Q7Z3E5 817 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 CCDC84Q86UT8 332 aaPredicted RBP10.94□□□□□ -0.66
UBFD1-202ENST00000563366 ERO1BQ86YB8 467 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 TRIML1Q8N9V2 468 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 RASSF8Q8NHQ8 419 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 ARID3AQ99856 593 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 RBSNQ9H1K0 784 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 DACH1Q9UI36 760 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 AFG3L2Q9Y4W6 797 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 LOXHD1Q8IVV2 1947 aa10.94□□□□□ -0.66
UBFD1-202ENST00000563366 TLL1O43897 1013 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 CFBP00751 764 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 CYP3A4P08684 503 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 HMGCS2P54868 508 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 GRIN1Q05586 938 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 COG2Q14746 738 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 POSTNQ15063 836 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 TKFCQ3LXA3 575 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 LONRF3Q496Y0 759 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 EAPPQ56P03 285 aaPredicted RBP10.93□□□□□ -0.66
UBFD1-202ENST00000563366 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.93□□□□□ -0.66
UBFD1-202ENST00000563366 IGSF22Q8N9C0 903 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 CALML4Q96GE6 196 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 MBOAT7Q96N66 472 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 MTMR9Q96QG7 549 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 DISC1Q9NRI5 854 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 FBXO28Q9NVF7 368 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 HOXC10Q9NYD6 342 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 TUBE1Q9UJT0 475 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 MRVI1Q9Y6F6 885 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 SNCAIPQ9Y6H5 919 aa10.93□□□□□ -0.66
UBFD1-202ENST00000563366 KDM3AQ9Y4C1 1321 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 VWA5AO00534 786 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 CXCL11O14625 94 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 ATP2A1O14983 1001 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 TDP2O95551 362 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 ADH1BP00325 375 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 CIITAP33076 1130 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 STAT6P42226 847 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms