RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ANO3Q9BYT9 981 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 AP5M1Q9H0R1 490 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 GLT8D2Q9H1C3 349 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 SPC25Q9HBM1 224 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 TELO2Q9Y4R8 837 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 MRVI1Q9Y6F6 885 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 A0A0C4DFX4 3053 aa9.79□□□□□ -0.84
UBR1-204ENST00000563239 RANBP2P49792 3224 aaKnown RBP9.79□□□□□ -0.84
UBR1-204ENST00000563239 H0YGN5 161 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 ATP9AO75110 1047 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 CDKL5O76039 1030 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 FOSP01100 380 aaPredicted RBP9.78□□□□□ -0.84
UBR1-204ENST00000563239 GH1P01241 217 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 TGFB3P10600 412 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 RTP1P59025 263 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 PURAQ00577 322 aaKnown RBP9.78□□□□□ -0.84
UBR1-204ENST00000563239 AP3B2Q13367 1082 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 TRIM60Q495X7 471 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 CELF3Q5SZQ8 465 aaKnown RBP9.78□□□□□ -0.84
UBR1-204ENST00000563239 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 KCNV1Q6PIU1 500 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 CPLX2Q6PUV4 134 aaKnown RBP9.78□□□□□ -0.84
UBR1-204ENST00000563239 SLC43A3Q8NBI5 491 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 CCDC12Q8WUD4 166 aaPredicted RBP9.78□□□□□ -0.84
UBR1-204ENST00000563239 AFG1LQ8WV93 481 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 C6orf50Q9HD87 102 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 ORC3Q9UBD5 711 aaPredicted RBP9.78□□□□□ -0.84
UBR1-204ENST00000563239 KCNJ14Q9UNX9 436 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 CEP290O15078 2479 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 ELP1O95163 1332 aa9.78□□□□□ -0.84
UBR1-204ENST00000563239 FIBPO43427 364 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 EVI5O60447 810 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 SORBS3O60504 671 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 GGPS1O95749 300 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 MMP3P08254 477 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 CYP3A4P08684 503 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
UBR1-204ENST00000563239 KCNA2P16389 499 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 GNA11P29992 359 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 CPT1AP50416 773 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 PSMC6P62333 389 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 ARHGAP4P98171 946 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 HSDL1Q3SXM5 330 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 CCDC83Q8IWF9 413 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 C7orf61Q8IZ16 206 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 FAM177A1Q8N128 213 aaPredicted RBP9.77□□□□□ -0.85
UBR1-204ENST00000563239 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
UBR1-204ENST00000563239 DAGLBQ8NCG7 672 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 KAT2BQ92831 832 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 GPRASP2Q96D09 838 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 ZSCAN31Q96LW9 406 aaPredicted RBP9.77□□□□□ -0.85
UBR1-204ENST00000563239 MXRA8Q9BRK3 442 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 PHF20Q9BVI0 1012 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 UPF2Q9HAU5 1272 aaKnown RBP9.77□□□□□ -0.85
UBR1-204ENST00000563239 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 STARD7Q9NQZ5 370 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 PCDHA4Q9UN74 947 aa9.77□□□□□ -0.85
UBR1-204ENST00000563239 IGLV3-22A0A075B6J6 115 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 FAM86B1E9PN63 330 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 ARVCFO00192 962 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 MEIS1O00470 390 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 ZEB2O60315 1214 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 CABYRO75952 493 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 MYL3P08590 195 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 FAM86B2P0C5J1 330 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 ARP10275 920 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 NLRP5P59047 1200 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 TLE2Q04725 743 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 GNPTABQ3T906 1256 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 CEP55Q53EZ4 464 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 CYFIP1Q7L576 1253 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 ANKRD33Q7Z3H0 272 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 NLRX1Q86UT6 975 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
UBR1-204ENST00000563239 BLIDQ8IZY5 108 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 PPTC7Q8NI37 304 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 BICD2Q8TD16 824 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 PPP1R13LQ8WUF5 828 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 GLT1D1Q96MS3 346 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 ALG1Q9BT22 464 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 EHMT1Q9H9B1 1298 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 KCNH7Q9NS40 1196 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 ZMYND8Q9ULU4 1186 aaPredicted RBP9.76□□□□□ -0.85
UBR1-204ENST00000563239 ATP11BQ9Y2G3 1177 aa9.76□□□□□ -0.85
UBR1-204ENST00000563239 A0A0U1RQG5 324 aaPredicted RBP9.75□□□□□ -0.85
UBR1-204ENST00000563239 TRIM43BA6NCK2 446 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 KPNA6O60684 536 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 SYN1P17600 705 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 CIITAP33076 1130 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 FAAP100Q0VG06 881 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 ITGB3BPQ13352 177 aaPredicted RBP9.75□□□□□ -0.85
UBR1-204ENST00000563239 MTMR1Q13613 665 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 ITGA7Q13683 1181 aa9.75□□□□□ -0.85
UBR1-204ENST00000563239 NEDD9Q14511 834 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms