RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SDE2Q6IQ49 451 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 SAPCD2Q86UD0 394 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 CABP7Q86V35 215 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 CPNE8Q86YQ8 564 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 CCDC103Q8IW40 242 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 PPIL6Q8IXY8 311 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 SYNPOQ8N3V7 929 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 APPBP2Q92624 585 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 IPO9Q96P70 1041 aaKnown RBP4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 MTA3Q9BTC8 594 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 RXFP1Q9HBX9 757 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 TMEFF2Q9UIK5 374 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 FAN1Q9Y2M0 1017 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 RWDD3Q9Y3V2 267 aa4.78□□□□□ -1.64
SHCBP1-202ENST00000563219 SH3D21A4FU49 640 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 LTBRP36941 435 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 TRIM61Q5EBN2 209 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 STYK1Q6J9G0 422 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 LIPIQ6XZB0 460 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 MAMDC2Q7Z304 686 aaPredicted RBP4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 B3GNT8Q7Z7M8 397 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 ADGRG2Q8IZP9 1017 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 NETO2Q8NC67 525 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 ZNF526Q8TF50 670 aaPredicted RBP4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 DCAF4Q8WV16 495 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 CPA5Q8WXQ8 436 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 ALG3Q92685 438 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 DIO2Q92813 273 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 PEX11GQ96HA9 241 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 ZFYVE21Q9BQ24 234 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 MRPL4Q9BYD3 311 aaKnown RBP4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 ADAM7Q9H2U9 754 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 GPR27Q9NS67 375 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 FANCLQ9NW38 375 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 NUDT5Q9UKK9 219 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 PMF1-BGLAPU3KQ54 211 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 CADPSQ9ULU8 1353 aa4.77□□□□□ -1.65
SHCBP1-202ENST00000563219 C7orf72A4D263 438 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 KCNQ2O43526 872 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 CDC45O75419 566 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 ZBTB7AO95365 584 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 PMLP29590 882 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 MC3RP41968 323 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 GABREP78334 506 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 TCEA2Q15560 299 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 INF2Q27J81 1249 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 PLEKHG4Q58EX7 1191 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 ZFYVE27Q5T4F4 411 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 C16orf86Q6ZW13 317 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 USP53Q70EK8 1073 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 PTPRN2Q92932 1015 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 BCAS3Q9H6U6 928 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 NCOA5Q9HCD5 579 aaKnown RBP4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 GULP1Q9UBP9 304 aa4.76□□□□□ -1.65
SHCBP1-202ENST00000563219 A0A1B0GTL3 188 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 BLACEA4D250 179 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 PLD2O14939 933 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 NPHS1O60500 1241 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 RFPL3O75679 317 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 HSD3B2P26439 372 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 DLX2Q07687 328 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 PRRT2Q7Z6L0 340 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 KIAA0907Q7Z7F0 614 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 Q8N1Y9 231 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 RCBTB1Q8NDN9 531 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 GSTCDQ8NEC7 633 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 USP33Q8TEY7 942 aa4.75□□□□□ -1.65
SHCBP1-202ENST00000563219 ASXL2Q76L83 1435 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 AQP7O14520 342 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 PPP1R12AO14974 1030 aaPredicted RBP4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 PRICKLE3O43900 615 aaPredicted RBP4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 EFCAB14O75071 495 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 ASMTLO95671 621 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 FUCA1P04066 466 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 LCP1P13796 627 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 GTF2A2P52657 109 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 GPR85P60893 370 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 CACNB2Q08289 660 aaPredicted RBP4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 RTP5Q14D33 572 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 FNDC3BQ53EP0 1204 aaKnown RBP4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 NT5DC1Q5TFE4 455 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 WWC2Q6AWC2 1192 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 KCNT2Q6UVM3 1135 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 DBX2Q6ZNG2 339 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 PLEKHO2Q8TD55 490 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 DPF3Q92784 378 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 FEZ1Q99689 392 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 SPATA25Q9BR10 227 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 PHF20Q9BVI0 1012 aa4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 TIMM13Q9Y5L4 95 aaPredicted RBP4.74□□□□□ -1.65
SHCBP1-202ENST00000563219 MYO1BO43795 1136 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 NOBOXO60393 691 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 MSCO60682 206 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 NTRK1P04629 796 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 NAT1P18440 290 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms