RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 TNFRSF25Q93038 417 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 CYP3A7-CYP3A51PA0A087WV96 503 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 ADCY6O43306 1168 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 GH1P01241 217 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 EN2P19622 333 aaPredicted RBP18.61■□□□□ 0.57
USB1-206ENST00000562534 CYP3A7P24462 503 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 LAMC2Q13753 1193 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 INF2Q27J81 1249 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
USB1-206ENST00000562534 MOXD1Q6UVY6 613 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 TLK2Q86UE8 772 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 DHX37Q8IY37 1157 aaKnown RBP18.61■□□□□ 0.57
USB1-206ENST00000562534 UPF3AQ9H1J1 476 aaKnown RBP18.61■□□□□ 0.57
USB1-206ENST00000562534 KCNH7Q9NS40 1196 aa18.61■□□□□ 0.57
USB1-206ENST00000562534 FAM86B1E9PN63 330 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 ZEB2O60315 1214 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 ARIH2O95376 493 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 PGK1P00558 417 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 FAM86B2P0C5J1 330 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 C6orf222P0C671 652 aaPredicted RBP18.6■□□□□ 0.57
USB1-206ENST00000562534 U2AF2P26368 475 aaKnown RBP eCLIP18.6■□□□□ 0.57
USB1-206ENST00000562534 GNASQ5JWF2 1037 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 TMEM63BQ5T3F8 832 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 NEK8Q86SG6 692 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 PLA2G4DQ86XP0 818 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 PCSK9Q8NBP7 692 aaKnown RBP18.6■□□□□ 0.57
USB1-206ENST00000562534 OR6J1Q8NGC5 347 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 CYP2W1Q8TAV3 490 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 EMID1Q96A84 441 aaPredicted RBP18.6■□□□□ 0.57
USB1-206ENST00000562534 TSEN34Q9BSV6 310 aaKnown RBP18.6■□□□□ 0.57
USB1-206ENST00000562534 MLXIPQ9HAP2 919 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 FOXD4L1Q9NU39 408 aa18.6■□□□□ 0.57
USB1-206ENST00000562534 HTTP42858 3142 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 DNM1LO00429 736 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 EDIL3O43854 480 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 ADAMTS4O75173 837 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 GCFC2P16383 781 aaKnown RBP18.59■□□□□ 0.57
USB1-206ENST00000562534 CPT1AP50416 773 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 SETQ01105 290 aaPredicted RBP18.59■□□□□ 0.57
USB1-206ENST00000562534 SP2Q02086 613 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 LRRC41Q15345 812 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 LETM2Q2VYF4 491 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 CELF3Q5SZQ8 465 aaKnown RBP18.59■□□□□ 0.57
USB1-206ENST00000562534 MYSM1Q5VVJ2 828 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 MCTP1Q6DN14 999 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 NOSTRINQ8IVI9 506 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 KLHDC9Q8NEP7 349 aa18.59■□□□□ 0.57
USB1-206ENST00000562534 SYNRGQ9UMZ2 1314 aa18.58■□□□□ 0.57
USB1-206ENST00000562534 IGLV3-22A0A075B6J6 115 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 KBTBD13C9JR72 458 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 KPNA6O60684 536 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 GGPS1O95749 300 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
USB1-206ENST00000562534 ARP10275 920 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 CST5P28325 142 aaPredicted RBP18.58■□□□□ 0.56
USB1-206ENST00000562534 SOX10P56693 466 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 SEMA3FQ13275 785 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 FSCN1Q16658 493 aaKnown RBP18.58■□□□□ 0.56
USB1-206ENST00000562534 Q4G0T1 1027 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 PRR16Q569H4 304 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 EARS2Q5JPH6 523 aaKnown RBP18.58■□□□□ 0.56
USB1-206ENST00000562534 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.56
USB1-206ENST00000562534 COPS5Q92905 334 aa18.58■□□□□ 0.56
USB1-206ENST00000562534 LENG1Q96BZ8 264 aaPredicted RBP18.58■□□□□ 0.56
USB1-206ENST00000562534 A6NJR5 290 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 ATP9AO75110 1047 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 SYT1P21579 422 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 UBA1P22314 1058 aaKnown RBP18.57■□□□□ 0.56
USB1-206ENST00000562534 ARHGAP1Q07960 439 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 KCNA10Q16322 511 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 METTL7BQ6UX53 244 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 AGO4Q9HCK5 861 aaKnown RBP18.57■□□□□ 0.56
USB1-206ENST00000562534 TBC1D22BQ9NU19 505 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 KIAA1217Q5T5P2 1943 aa18.57■□□□□ 0.56
USB1-206ENST00000562534 MOXD2PA6NHM9 499 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 IPO5O00410 1097 aaKnown RBP18.56■□□□□ 0.56
USB1-206ENST00000562534 CTAGE5O15320 804 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
USB1-206ENST00000562534 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 KCNA2P16389 499 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 TRAPPC10P48553 1259 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 CCSAPQ6IQ19 270 aaPredicted RBP18.56■□□□□ 0.56
USB1-206ENST00000562534 CYFIP1Q7L576 1253 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 NECAB2Q7Z6G3 386 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 PPTC7Q8NI37 304 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 SPATA33Q96N06 139 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 ZNF577Q9BSK1 485 aa18.56■□□□□ 0.56
USB1-206ENST00000562534 DDX25Q9UHL0 483 aaKnown RBP18.56■□□□□ 0.56
USB1-206ENST00000562534 NOL7Q9UMY1 257 aaKnown RBP18.56■□□□□ 0.56
USB1-206ENST00000562534 NFASCO94856 1347 aa18.55■□□□□ 0.56
USB1-206ENST00000562534 DGKDQ16760 1214 aa18.55■□□□□ 0.56
USB1-206ENST00000562534 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
USB1-206ENST00000562534 AFG1LQ8WV93 481 aa18.55■□□□□ 0.56
USB1-206ENST00000562534 POLR3EQ9NVU0 708 aa18.55■□□□□ 0.56
USB1-206ENST00000562534 KIAA0100Q14667 2235 aaKnown RBP18.55■□□□□ 0.56
USB1-206ENST00000562534 VPS37CA5D8V6 355 aaPredicted RBP18.54■□□□□ 0.56
USB1-206ENST00000562534 FAM205CA6NFA0 338 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms