RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 CHMP4BP1P59074 171 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 HIC1Q14526 733 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 FAM47CQ5HY64 1035 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 HEATR3Q7Z4Q2 680 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 SCLYQ96I15 445 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 PSTPIP2Q9H939 334 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 NAP1L2Q9ULW6 460 aaPredicted RBP12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 SPATA31C2B4DYI2 1134 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 STXBP3O00186 592 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 HAS3O00219 553 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 KPNA6O60684 536 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 ICAM3P32942 547 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 LAMC2Q13753 1193 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 TOB2Q14106 344 aaPredicted RBP12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 DGKDQ16760 1214 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 BRDTQ58F21 947 aaPredicted RBP12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 ERICH6BQ5W0A0 696 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 GDF6Q6KF10 455 aaPredicted RBP12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 NFRKBQ6P4R8 1299 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 ZNF365Q70YC5 407 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 FBXL16Q8N461 479 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 DEFB123Q8N688 67 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 PGBD1Q96JS3 809 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 RNPC3Q96LT9 517 aaKnown RBP12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 NID2Q14112 1375 aa12.76□□□□□ -0.37
LPCAT4-202ENST00000562404 ATP9AO75110 1047 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 F2P00734 622 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 TGFB3P10600 412 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 ITGB5P18084 799 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 PSEN2P49810 448 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 RCAN1P53805 252 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 ZNF200P98182 395 aaPredicted RBP12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 PPIGQ13427 754 aaKnown RBP eCLIP12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 NTRK3Q16288 839 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 PKN1Q16512 942 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 RASIP1Q5U651 963 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 CYFIP1Q7L576 1253 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 TMEM199Q8N511 208 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 DHX38Q92620 1227 aaKnown RBP12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 KAT6AQ92794 2004 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 CUL5Q93034 780 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 WNT8BQ93098 351 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 FAM161BQ96MY7 647 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 SPATA33Q96N06 139 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 C16orf70Q9BSU1 422 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 ALG1Q9BT22 464 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 IL23AQ9NPF7 189 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 TMEM260Q9NX78 707 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 MTMR10Q9NXD2 777 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 CXXC1Q9P0U4 656 aaPredicted RBP12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 PCDHA6Q9UN73 950 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 PCDHA8Q9Y5H6 950 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 EYSQ5T1H1 3165 aa12.75□□□□□ -0.37
LPCAT4-202ENST00000562404 MYO9BQ13459 2157 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 GRXCR1A8MXD5 290 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 NAPAP54920 295 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 FGD1P98174 961 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 PTPN11Q06124 597 aaPredicted RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 MFSD10Q14728 455 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 KIAA0753Q2KHM9 967 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 KCNV1Q6PIU1 500 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 RUFY3Q7L099 469 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 PHKBQ93100 1093 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 RIC8AQ9NPQ8 531 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 BARHL2Q9NY43 387 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 UBIAD1Q9Y5Z9 338 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 WDR81Q562E7 1941 aa12.74□□□□□ -0.37
LPCAT4-202ENST00000562404 SMCO2A6NFE2 343 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 FIBPO43427 364 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 STAM2O75886 525 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 LGALS2P05162 132 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 KCNA2P16389 499 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 PSMA5P28066 241 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 CLK2P49760 499 aaKnown RBP12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 EVCP57679 992 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 GPNMBQ14956 572 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 PTGISQ16647 500 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 TRIM50Q86XT4 487 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms