RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 TRAF7Q6Q0C0 670 aa11.96□□□□□ -0.49
BBS4-205ENST00000562219 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.49
BBS4-205ENST00000562219 DHX37Q8IY37 1157 aaKnown RBP11.96□□□□□ -0.49
BBS4-205ENST00000562219 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
BBS4-205ENST00000562219 AMNQ9BXJ7 453 aa11.96□□□□□ -0.49
BBS4-205ENST00000562219 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.49
BBS4-205ENST00000562219 HCN4Q9Y3Q4 1203 aa11.96□□□□□ -0.49
BBS4-205ENST00000562219 OPLAHO14841 1288 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 LGR5O75473 907 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 IMMTQ16891 758 aaKnown RBP11.95□□□□□ -0.5
BBS4-205ENST00000562219 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 KCNV1Q6PIU1 500 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 WNT8BQ93098 351 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 UBAC1Q9BSL1 405 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 DSCC1Q9BVC3 393 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 KRT23Q9C075 422 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 EPHX3Q9H6B9 360 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 VAT1LQ9HCJ6 419 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 DIAPH3Q9NSV4 1193 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
BBS4-205ENST00000562219 ZSWIM5Q9P217 1185 aa11.95□□□□□ -0.5
BBS4-205ENST00000562219 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
BBS4-205ENST00000562219 HIP1O00291 1037 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 PPFIA4O75335 1185 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 RGS20O76081 388 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
BBS4-205ENST00000562219 TMEM31Q5JXX7 168 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 CELF3Q5SZQ8 465 aaKnown RBP11.94□□□□□ -0.5
BBS4-205ENST00000562219 STOX1Q6ZVD7 989 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 SERINC5Q86VE9 423 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 SMC5Q8IY18 1101 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 SPATA33Q96N06 139 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 PDCD2LQ9BRP1 358 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 OSBPL3Q9H4L5 887 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
BBS4-205ENST00000562219 CNNM2Q9H8M5 875 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 INSL6Q9Y581 213 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
BBS4-205ENST00000562219 ZBTB5O15062 677 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
BBS4-205ENST00000562219 GGPS1O95749 300 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 AMHP03971 560 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
BBS4-205ENST00000562219 THPOP40225 353 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 ZNF200P98182 395 aaPredicted RBP11.93□□□□□ -0.5
BBS4-205ENST00000562219 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
BBS4-205ENST00000562219 HIC1Q14526 733 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 PGM5Q15124 567 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 HSDL1Q3SXM5 330 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 IFIT1BQ5T764 474 aaKnown RBP11.93□□□□□ -0.5
BBS4-205ENST00000562219 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 PLEKHM2Q8IWE5 1019 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 STAG2Q8N3U4 1231 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 SAMD3Q8N6K7 520 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 FBXO22Q8NEZ5 403 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 CTNNA3Q9UI47 895 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 PCDHA1Q9Y5I3 950 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 KIAA1671Q9BY89 1806 aa11.93□□□□□ -0.5
BBS4-205ENST00000562219 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 SORBS3O60504 671 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 GPR37L1O60883 481 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 TGFB3P10600 412 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 CCND2P30279 289 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
BBS4-205ENST00000562219 HOXC8P31273 242 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
BBS4-205ENST00000562219 TRAF1Q13077 416 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 AAMPQ13685 434 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 LEXMQ3ZCV2 418 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 PLEKHG4Q58EX7 1191 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.92□□□□□ -0.5
BBS4-205ENST00000562219 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 CHD1LQ86WJ1 897 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 MYOCDQ8IZQ8 938 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 DBF4BQ8NFT6 615 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 IL31RAQ8NI17 732 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
BBS4-205ENST00000562219 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.52e-7■■■□□ 18.7
BBS4-205ENST00000562219 ATP6V0A1Q93050 837 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 C17orf80Q9BSJ5 609 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 C16orf70Q9BSU1 422 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 C11orf16Q9NQ32 467 aa11.92□□□□□ -0.5
BBS4-205ENST00000562219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.91□□□□□ -0.5
BBS4-205ENST00000562219 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
BBS4-205ENST00000562219 H3BRB1 525 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 CAND2O75155 1236 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 LGALS2P05162 132 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 KCNA5P22460 613 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
BBS4-205ENST00000562219 SP2Q02086 613 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 NUCB1Q02818 461 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 SEC23AQ15436 765 aa11.91□□□□□ -0.5
BBS4-205ENST00000562219 MRPL38Q96DV4 380 aaKnown RBP11.91□□□□□ -0.5
BBS4-205ENST00000562219 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms