RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ARAP3Q8WWN8 1544 aa6.2□□□□□ -1.42
CAPN3-211ENST00000562199 KANK1Q14678 1352 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 FSD2A1L4K1 749 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 AKR1B15C9JRZ8 316 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 RTCAO00442 366 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 COBLO75128 1261 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 KRT13P13646 458 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 RPS2P15880 293 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 DESP17661 470 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 USP8P40818 1118 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 KIF11P52732 1056 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 RAC1P63000 192 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 PURAQ00577 322 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 DEUP1Q05D60 604 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 LRRC74AQ0VAA2 488 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 CCDC173Q0VFZ6 552 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 SLC5A9Q2M3M2 681 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 DALRD3Q5D0E6 543 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 RRP12Q5JTH9 1297 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 TTC19Q6DKK2 380 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 LARP1Q6PKG0 1096 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 BTLAQ7Z6A9 289 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 GALNT5Q7Z7M9 940 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 TMEM151BQ8IW70 566 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 KCNN1Q92952 543 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 CFAP36Q96G28 342 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 ALPK1Q96QP1 1244 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 UBE2OQ9C0C9 1292 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 CCDC113Q9H0I3 377 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 TAOK3Q9H2K8 898 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 CNNM2Q9H8M5 875 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 UPF2Q9HAU5 1272 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 ZCCHC17Q9NP64 241 aaKnown RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 TTLL3Q9Y4R7 772 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 AFG3L2Q9Y4W6 797 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 SNCAIPQ9Y6H5 919 aa6.19□□□□□ -1.42
CAPN3-211ENST00000562199 V9GYY5 206 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-211ENST00000562199 SETBP1Q9Y6X0 1596 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 NCOA3Q9Y6Q9 1424 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 NRXN1Q9ULB1 1477 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 CASQ2O14958 399 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ZBTB39O15060 712 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 AKAP10O43572 662 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 KLHL41O60662 606 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 BCAR3O75815 825 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 RASGRP1O95267 797 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 BAG2O95816 211 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ABL1P00519 1130 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 SLC4A1P02730 911 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 CYP1A2P05177 515 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 MTHFD1P11586 935 aaKnown RBP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ATF4P18848 351 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 GNAT2P19087 354 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ITGB7P26010 798 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 RAD52P43351 418 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 RENBPP51606 427 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 KCNQ4P56696 695 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 GRM1Q13255 1194 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ZNF211Q13398 564 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ECM1Q16610 540 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 TBC1D25Q3MII6 688 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 TNNI3KQ59H18 835 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 METTL24Q5JXM2 366 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 HHATQ5VTY9 493 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 POTEAQ6S8J7 498 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 OLFML1Q6UWY5 402 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 USP51Q70EK9 711 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 TMEM110Q86TL2 294 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 DDX42Q86XP3 938 aaKnown RBP eCLIP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 DZIP1Q86YF9 867 aaKnown RBP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 HOMER1Q86YM7 354 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ZNF654Q8IZM8 581 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 FAM76AQ8TAV0 307 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 NUDT8Q8WV74 236 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.18□□□□□ -1.42
CAPN3-211ENST00000562199 CLMNQ96JQ2 1002 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 TSGA13Q96PP4 275 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ATG3Q9NT62 314 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 RNF19AQ9NV58 838 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 AIPL1Q9NZN9 384 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 SIRPGQ9P1W8 387 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 GTF2IRD1Q9UHL9 959 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 TRAK1Q9UPV9 953 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 TMX2Q9Y320 296 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 PCDHGB7Q9Y5F8 929 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 DGKBQ9Y6T7 804 aa6.18□□□□□ -1.42
CAPN3-211ENST00000562199 ALG1L2C9J202 215 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 J3KRW8 73 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 APAF1O14727 1248 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 SORBS3O60504 671 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 FOXD2O60548 495 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 ICMTO60725 284 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 STAM2O75886 525 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 BAG4O95429 457 aaKnown RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 APBB3O95704 486 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 TRIM27P14373 513 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 NID1P14543 1247 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 FERP16591 822 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 CYP11B2P19099 503 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms