RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 RPUSD2Q8IZ73 545 aaKnown RBP6.35□□□□□ -1.39
CNOT1-203ENST00000562046 ABHD4Q8TB40 342 aa6.35□□□□□ -1.39
CNOT1-203ENST00000562046 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
CNOT1-203ENST00000562046 LEO1Q8WVC0 666 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-203ENST00000562046 SMURF1Q9HCE7 757 aa6.35□□□□□ -1.39
CNOT1-203ENST00000562046 GSTA4O15217 222 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 TADA3O75528 432 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 F2P00734 622 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 APPP05067 770 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 DBHP09172 617 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 COL6A2P12110 1019 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 PDE6AP16499 860 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 SLC6A11P48066 632 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 DNM2P50570 870 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 DSG1Q02413 1049 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 DHCR24Q15392 516 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 SKOR2Q2VWA4 1001 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-203ENST00000562046 DDX46Q7L014 1031 aaKnown RBP6.34□□□□□ -1.39
CNOT1-203ENST00000562046 SIRT2Q8IXJ6 389 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 NETO2Q8NC67 525 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 PIP4K2CQ8TBX8 421 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 USP33Q8TEY7 942 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 SLC6A20Q9NP91 592 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 CATSPERZQ9NTU4 200 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 B4GALT6Q9UBX8 382 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 ATP8A1Q9Y2Q0 1164 aa6.34□□□□□ -1.39
CNOT1-203ENST00000562046 COA3Q9Y2R0 106 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-203ENST00000562046 DGKIO75912 1065 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 GNAT1P11488 350 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 IBSPP21815 317 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-203ENST00000562046 CNGA1P29973 690 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 JAM2P57087 298 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 ST5P78524 1137 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 NFKB2Q00653 900 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 SPIRE1Q08AE8 756 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 GPR19Q15760 415 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 BICRALQ6AI39 1079 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 OSTM1Q86WC4 334 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 DDX42Q86XP3 938 aaKnown RBP eCLIP6.33□□□□□ -1.4
CNOT1-203ENST00000562046 CISD2Q8N5K1 135 aaKnown RBP6.33□□□□□ -1.4
CNOT1-203ENST00000562046 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 KIRREL1Q96J84 757 aa6.33□□□□□ -1.4
CNOT1-203ENST00000562046 hCG_2014768A0A024R1R8 64 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 ZNF891A8MT65 544 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-203ENST00000562046 SGSM2O43147 1006 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 BPIP17213 487 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 ARL4AP40617 200 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 IGBP1P78318 339 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 CRY1Q16526 586 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 HHIPL2Q6UWX4 724 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 ARHGAP36Q6ZRI8 547 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 ANKRD13AQ8IZ07 590 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 UHMK1Q8TAS1 419 aaKnown RBP6.32□□□□□ -1.4
CNOT1-203ENST00000562046 PANK1Q8TE04 598 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 SIT1Q9Y3P8 196 aa6.32□□□□□ -1.4
CNOT1-203ENST00000562046 A0A1W2PQJ5 194 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 HGSO14964 777 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 CYBBP04839 570 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 ZBTB48P10074 688 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 SDHBP21912 280 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 CDKN1CP49918 316 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 STRN3Q13033 797 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 STEAP3Q658P3 488 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 FSTL4Q6MZW2 842 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 PAQR3Q6TCH7 311 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 CABP7Q86V35 215 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 PRPF38AQ8NAV1 312 aaKnown RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 SMC1BQ8NDV3 1235 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 SEC14L1Q92503 715 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 INTS4Q96HW7 963 aaKnown RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-203ENST00000562046 SMOC1Q9H4F8 434 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 CABP5Q9NP86 173 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
CNOT1-203ENST00000562046 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-203ENST00000562046 PAPLNO95428 1278 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 ATP2A2P16615 1042 aaKnown RBP6.3□□□□□ -1.4
CNOT1-203ENST00000562046 ITGB5P18084 799 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 ADCYAP1R1P41586 468 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 EPHA5P54756 1037 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 PTRH1Q86Y79 214 aaKnown RBP6.3□□□□□ -1.4
CNOT1-203ENST00000562046 NOSTRINQ8IVI9 506 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 C2orf69Q8N8R5 385 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 OR2W6PQ8NHA6 318 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 RXFP1Q9HBX9 757 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 DSEQ9UL01 958 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 ZNF652Q9Y2D9 606 aa6.3□□□□□ -1.4
CNOT1-203ENST00000562046 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
CNOT1-203ENST00000562046 KRIT1O00522 736 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms