RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 SEMA3FQ13275 785 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 PPIGQ13427 754 aaKnown RBP eCLIP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 TMEM240Q5SV17 173 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 GDF6Q6KF10 455 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 OTOP2Q7RTS6 562 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 UPF3BQ9BZI7 483 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 SCN10AQ9Y5Y9 1956 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 SCN5AQ14524 2016 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 ADAMTS3O15072 1205 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 REC8O95072 547 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 SMARCA1P28370 1054 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 FUT2Q10981 343 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 MFSD10Q14728 455 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 PTGISQ16647 500 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 DGKDQ16760 1214 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 KCNB2Q92953 911 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 PHKBQ93100 1093 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 NCOA5Q9HCD5 579 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 IL23AQ9NPF7 189 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 RBM28Q9NW13 759 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 MAP3K20Q9NYL2 800 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 HDAC6Q9UBN7 1215 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 PCDHA6Q9UN73 950 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 PCDHA8Q9Y5H6 950 aa10.89□□□□□ -0.67
NSMCE1-203ENST00000562039 ZBBXA8MT70 800 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 KPNA6O60684 536 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 ATP9AO75110 1047 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 HMGB1P09429 215 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 PBX2P40425 430 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 STK3Q13188 491 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 HIC1Q14526 733 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 GNPTABQ3T906 1256 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 JAKMIP3Q5VZ66 844 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 C7orf31Q8N865 590 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 PPTC7Q8NI37 304 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 USP26Q9BXU7 913 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 MAF1Q9H063 256 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 MTMR10Q9NXD2 777 aa10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 CXXC1Q9P0U4 656 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-203ENST00000562039 SMCO2A6NFE2 343 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 SPDYE3A6NKU9 549 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 STXBP3O00186 592 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 FIBPO43427 364 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 FGBP02675 491 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 SUPT20HL2P0C7V6 817 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 ADCY7P51828 1080 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 PCNX4Q63HM2 1172 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 NFRKBQ6P4R8 1299 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 SAMD3Q8N6K7 520 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 RETREG2Q8NC44 543 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 WNT8BQ93098 351 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 GUCD1Q96NT3 240 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 SLC26A6Q9BXS9 759 aa10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 FTOQ9C0B1 505 aaKnown RBP eCLIP10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 TTYH1Q9H313 450 aaPredicted RBP10.87□□□□□ -0.67
NSMCE1-203ENST00000562039 FRMPD4Q14CM0 1322 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 LGALS2P05162 132 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 ITGB5P18084 799 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 PSMA5P28066 241 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 RABGGTBP53611 331 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 TOB2Q14106 344 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 PSRC1Q6PGN9 363 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 KCNV1Q6PIU1 500 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 RUFY3Q7L099 469 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 NLRX1Q86UT6 975 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 CYP2W1Q8TAV3 490 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 RASGRP4Q8TDF6 673 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 MYLIPQ8WY64 445 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 DHX38Q92620 1227 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 EMID1Q96A84 441 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 VWCEQ96DN2 955 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 INPP4AQ96PE3 977 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 CTAGE1Q96RT6 745 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 C16orf70Q9BSU1 422 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
NSMCE1-203ENST00000562039 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 F2P00734 622 aa10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 IQCF3P0C7M6 154 aa10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 MYOGP15173 224 aa10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 DNAJB2P25686 324 aa10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 MARK3P27448 753 aa10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 PDIA3P30101 505 aaKnown RBP10.85□□□□□ -0.67
NSMCE1-203ENST00000562039 ICAM3P32942 547 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms