RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 AP5M1Q9H0R1 490 aa3.72□□□□□ -1.81
CHD9-204ENST00000561869 CLDND1Q9NY35 253 aa3.72□□□□□ -1.81
CHD9-204ENST00000561869 RTEL1Q9NZ71 1219 aa3.72□□□□□ -1.81
CHD9-204ENST00000561869 PMF1-BGLAPU3KQ54 211 aa3.72□□□□□ -1.81
CHD9-204ENST00000561869 ASXL2Q76L83 1435 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 FAM221BA6H8Z2 402 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 GTF2F1P35269 517 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD9-204ENST00000561869 SLURP1P55000 103 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 RASA3Q14644 834 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 NFIXQ14938 502 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 CR1LQ2VPA4 569 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 STYK1Q6J9G0 422 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 LBX2Q6XYB7 198 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 LIPIQ6XZB0 460 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 ETV3LQ6ZN32 361 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 MILR1Q7Z6M3 343 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 FAM126BQ8IXS8 530 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 ARRDC4Q8NCT1 418 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 FEZF2Q8TBJ5 459 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 DCAF4Q8WV16 495 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 DDX11Q96FC9 970 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 HIRIP3Q9BW71 556 aaPredicted RBP3.71□□□□□ -1.82
CHD9-204ENST00000561869 JAM3Q9BX67 310 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 LUC7LQ9NQ29 371 aaKnown RBP3.71□□□□□ -1.82
CHD9-204ENST00000561869 SIRPGQ9P1W8 387 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 ZNF652Q9Y2D9 606 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 FAN1Q9Y2M0 1017 aa3.71□□□□□ -1.82
CHD9-204ENST00000561869 HGSO14964 777 aaPredicted RBP3.7□□□□□ -1.82
CHD9-204ENST00000561869 SYN1P17600 705 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 STAT5AP42229 794 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 NFKB2Q00653 900 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 IFRD2Q12894 506 aaPredicted RBP3.7□□□□□ -1.82
CHD9-204ENST00000561869 HABP4Q5JVS0 413 aaKnown RBP3.7□□□□□ -1.82
CHD9-204ENST00000561869 STEAP3Q658P3 488 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 LRP10Q7Z4F1 713 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 ZBTB38Q8NAP3 1195 aaPredicted RBP3.7□□□□□ -1.82
CHD9-204ENST00000561869 CHAMP1Q96JM3 812 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 ZFYVE21Q9BQ24 234 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 C11orf84Q9BUA3 381 aaPredicted RBP3.7□□□□□ -1.82
CHD9-204ENST00000561869 EPB41L1Q9H4G0 881 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 PFDN2Q9UHV9 154 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 WASF3Q9UPY6 502 aa3.7□□□□□ -1.82
CHD9-204ENST00000561869 COA3Q9Y2R0 106 aaPredicted RBP3.7□□□□□ -1.82
CHD9-204ENST00000561869 CCDC85CA6NKD9 419 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 U2SURPO15042 1029 aaKnown RBP3.69□□□□□ -1.82
CHD9-204ENST00000561869 DGKIO75912 1065 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 LRG1P02750 347 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 C6orf222P0C671 652 aaPredicted RBP3.69□□□□□ -1.82
CHD9-204ENST00000561869 FAM153BP0C7A2 387 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 CYP2C8P10632 490 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 ITGA1P56199 1179 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 GPR85P60893 370 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 SSRP1Q08945 709 aaKnown RBP3.69□□□□□ -1.82
CHD9-204ENST00000561869 CHRNA2Q15822 529 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 MTERF2Q49AM1 385 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 FAM209AQ5JX71 171 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 PRR31Q5SQ13 230 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 CD300LDQ6UXZ3 194 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 STK32CQ86UX6 486 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 SCUBE1Q8IWY4 988 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 SP8Q8IXZ3 490 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 ZDHHC14Q8IZN3 488 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 CARFQ8N187 725 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 CXorf38Q8TB03 319 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.69□□□□□ -1.82
CHD9-204ENST00000561869 PIP4K2CQ8TBX8 421 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 ZBTB8AQ96BR9 441 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 EXOC2Q96KP1 924 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 SPATA25Q9BR10 227 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 PDGFDQ9GZP0 370 aaPredicted RBP3.69□□□□□ -1.82
CHD9-204ENST00000561869 SLC6A20Q9NP91 592 aa3.69□□□□□ -1.82
CHD9-204ENST00000561869 TRBV23-1A0A0A0MS06 115 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 NOBOXO60393 691 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 SASH1O94885 1247 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 THBS2P35442 1172 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 KCNC1P48547 511 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 ADAM9Q13443 819 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 SMAD4Q13485 552 aaKnown RBP3.68□□□□□ -1.82
CHD9-204ENST00000561869 LONRF2Q1L5Z9 754 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 CYP4F22Q6NT55 531 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 OTOP3Q7RTS5 596 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 GGNQ86UU5 652 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 IFNL3Q8IZI9 196 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 JMYQ8N9B5 988 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 KYQ8NBH2 561 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 PHOSPHO1Q8TCT1 267 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 CLEC4DQ8WXI8 215 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 KISS1RQ969F8 398 aaPredicted RBP3.68□□□□□ -1.82
CHD9-204ENST00000561869 MKL1Q969V6 931 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 DEPDC7Q96QD5 511 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 ADAM7Q9H2U9 754 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 SMOC1Q9H4F8 434 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 PCDH18Q9HCL0 1135 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 SNTG2Q9NY99 539 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 DTLQ9NZJ0 730 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 HSPBP1Q9NZL4 362 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 MYOTQ9UBF9 498 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 ASH2LQ9UBL3 628 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 PPP1R1BQ9UD71 204 aaPredicted RBP3.68□□□□□ -1.82
CHD9-204ENST00000561869 TRAF6Q9Y4K3 522 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms