RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PAFAH1B1P43034 410 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 NFIXQ14938 502 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 DBN1Q16643 649 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 PLAAQ9Y263 795 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 SCN7AQ01118 1682 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 A0A087X0B3 334 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 MACROD2A1Z1Q3 448 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 CREB3O43889 395 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 RANBP6O60518 1105 aaKnown RBP20.46■□□□□ 0.87
RAB40C-206ENST00000561781 FMNL1O95466 1100 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-206ENST00000561781 DRD4P21917 467 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 IARSP41252 1262 aaKnown RBP20.46■□□□□ 0.87
RAB40C-206ENST00000561781 PPP2R2AP63151 447 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 UBXN1Q04323 297 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 ITIH4Q14624 930 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 TTF1Q15361 905 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-206ENST00000561781 GIGYF2Q6Y7W6 1299 aaKnown RBP20.46■□□□□ 0.87
RAB40C-206ENST00000561781 RUFY4Q6ZNE9 571 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 MICU3Q86XE3 530 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 LMNTD2Q8IXW0 634 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 DNAJC7Q99615 494 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 PCDHB6Q9Y5E3 794 aa20.46■□□□□ 0.87
RAB40C-206ENST00000561781 EVI5O60447 810 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 FAM153BP0C7A2 387 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 NEXNQ0ZGT2 675 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 SFSWAPQ12872 951 aaKnown RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 FAM153CQ494X1 144 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 ACBD5Q5T8D3 534 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 PAGE5Q96GU1 130 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 PLCB1Q9NQ66 1216 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 FAM153AQ9UHL3 310 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 ANGEL1Q9UNK9 670 aaKnown RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 SRPRBQ9Y5M8 271 aaKnown RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 A0A087WZG4 1122 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 MAFGO15525 162 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 MMP10P09238 476 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 NQO1P15559 274 aaKnown RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 CARSP49589 748 aaKnown RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 TCP11X2Q5H9J9 407 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 CWC25Q9NXE8 425 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-206ENST00000561781 DENND2AQ9ULE3 1009 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 BCORQ6W2J9 1755 aa20.45■□□□□ 0.86
RAB40C-206ENST00000561781 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 MYL1P05976 194 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 TIMM10P62072 90 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 MMADHCQ9H3L0 296 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-206ENST00000561781 LUC7L2Q9Y383 392 aaKnown RBP20.44■□□□□ 0.86
RAB40C-206ENST00000561781 KCNJ18B7U540 433 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 KIF5AQ12840 1032 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 MAP3K12Q12852 859 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 KCNJ12Q14500 433 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 NTRK3Q16288 839 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 SMCR8Q8TEV9 937 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-206ENST00000561781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.44■□□□□ 0.86
RAB40C-206ENST00000561781 CHMP6Q96FZ7 201 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 GSDMAQ96QA5 445 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 HYOU1Q9Y4L1 999 aa20.44■□□□□ 0.86
RAB40C-206ENST00000561781 TACC1O75410 805 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 TMOD1P28289 359 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 HSPA9P38646 679 aaKnown RBP20.43■□□□□ 0.86
RAB40C-206ENST00000561781 ODF2Q5BJF6 829 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 APOA5Q6Q788 366 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 FLAD1Q8NFF5 587 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 NKX2-3Q8TAU0 364 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-206ENST00000561781 NUP98P52948 1817 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 WDR19Q8NEZ3 1342 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 A0A1B0GVG6 124 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 PHF20L1A8MW92 1017 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 AGBL2Q5U5Z8 902 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 APBB1IPQ7Z5R6 666 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-206ENST00000561781 ERICH1Q86X53 443 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
RAB40C-206ENST00000561781 MKL1Q969V6 931 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-206ENST00000561781 SMARCAL1Q9NZC9 954 aa20.43■□□□□ 0.86
RAB40C-206ENST00000561781 F8W031 263 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-206ENST00000561781 ZNF213O14771 459 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 IFIT1P09914 478 aaKnown RBP20.42■□□□□ 0.86
RAB40C-206ENST00000561781 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 CNBD1Q8NA66 436 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 IFT81Q8WYA0 676 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
RAB40C-206ENST00000561781 EPSTI1Q96J88 318 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 DNAAF2Q9NVR5 837 aaKnown RBP20.42■□□□□ 0.86
RAB40C-206ENST00000561781 ERVV-1B6SEH8 477 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 GUCY2FP51841 1108 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 TCIRG1Q13488 830 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 RILPL1Q5EBL4 403 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 CMPK2Q5EBM0 449 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 TRIM42Q8IWZ5 723 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 PIDD1Q9HB75 910 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 EPB41L5Q9HCM4 733 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 KCNJ14Q9UNX9 436 aa20.42■□□□□ 0.86
RAB40C-206ENST00000561781 SPDYE5A6NIY4 337 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 ASAP2O43150 1006 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 MMP1P03956 469 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms