RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 KANSL2Q9H9L4 492 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 SPC25Q9HBM1 224 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 MARCH2Q9P0N8 246 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 DIP2BQ9P265 1576 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 TRBV23OR9-2A0A075B6M9 112 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 BLACEA4D250 179 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 PEX10O60683 326 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 EFCAB14O75071 495 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 MED14OSP0DP75 135 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 NAT1P18440 290 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 GLDCP23378 1020 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 MC3RP41968 323 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 LIMS1P48059 325 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 YBX1P67809 324 aaKnown RBP5.23□□□□□ -1.57
HERC1-215ENST00000561436 GABREP78334 506 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 PRR5P85299 388 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 VMACQ2NL98 169 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 FNDC3BQ53EP0 1204 aaKnown RBP5.23□□□□□ -1.57
HERC1-215ENST00000561436 FAM209AQ5JX71 171 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 LCNL1Q6ZST4 164 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 ANKRD13AQ8IZ07 590 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 LZTR1Q8N653 840 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 KREMEN2Q8NCW0 462 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 MFSD3Q96ES6 412 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 SYT3Q9BQG1 590 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 MTA3Q9BTC8 594 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 NCOA5Q9HCD5 579 aaKnown RBP5.23□□□□□ -1.57
HERC1-215ENST00000561436 SFMBT1Q9UHJ3 866 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 KDM6BO15054 1643 aa5.23□□□□□ -1.57
HERC1-215ENST00000561436 ADGRL1O94910 1474 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 NUAK1O60285 661 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 RFPL3O75679 317 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 NTRK1P04629 796 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 GYS2P54840 703 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 GFRA1P56159 465 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 FZD5Q13467 585 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 FILIP1Q7Z7B0 1213 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 LDHDQ86WU2 507 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 IGDCC3Q8IVU1 814 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 USP33Q8TEY7 942 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 KISS1RQ969F8 398 aaPredicted RBP5.22□□□□□ -1.57
HERC1-215ENST00000561436 OSBP2Q969R2 916 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 EXOC2Q96KP1 924 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 EPB41L4AQ9HCS5 686 aaPredicted RBP5.22□□□□□ -1.57
HERC1-215ENST00000561436 DBR1Q9UK59 544 aaKnown RBP5.22□□□□□ -1.57
HERC1-215ENST00000561436 CNOT6Q9ULM6 557 aaKnown RBP5.22□□□□□ -1.57
HERC1-215ENST00000561436 CD2APQ9Y5K6 639 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 KDM5BQ9UGL1 1544 aa5.22□□□□□ -1.57
HERC1-215ENST00000561436 AQP7O14520 342 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 PPM1GO15355 546 aaPredicted RBP5.21□□□□□ -1.58
HERC1-215ENST00000561436 MEFVO15553 781 aaPredicted RBP5.21□□□□□ -1.58
HERC1-215ENST00000561436 SEMA7AO75326 666 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 SCG5P05408 212 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 GLI4P10075 376 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 BCL6P41182 706 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 KCNAB2Q13303 367 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 IQCEQ6IPM2 695 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 ZC3H14Q6PJT7 736 aaKnown RBP5.21□□□□□ -1.58
HERC1-215ENST00000561436 ZNF662Q6ZS27 426 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 USP53Q70EK8 1073 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 MAMDC2Q7Z304 686 aaPredicted RBP5.21□□□□□ -1.58
HERC1-215ENST00000561436 NLRP10Q86W26 655 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 PPIL6Q8IXY8 311 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 NIM1KQ8IY84 436 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 TMEFF1Q8IYR6 380 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 RCBTB1Q8NDN9 531 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 MZB1Q8WU39 189 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 PTPRN2Q92932 1015 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 NINJ1Q92982 152 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 NDOR1Q9UHB4 597 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 KCTD3Q9Y597 815 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 PCDHA5Q9Y5H7 936 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 EPRSP07814 1512 aaKnown RBP5.21□□□□□ -1.58
HERC1-215ENST00000561436 MAGI3Q5TCQ9 1506 aa5.21□□□□□ -1.58
HERC1-215ENST00000561436 RUSC2Q8N2Y8 1516 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 hCG_2014768A0A024R1R8 64 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 MYO1BO43795 1136 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 DLX3O60479 287 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 NPHS1O60500 1241 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 CYBBP04839 570 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 FLT3P36888 993 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 MAPKAPK2P49137 400 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 ANAPC15P60006 121 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 PABPC4Q13310 644 aaKnown RBP eCLIP5.2□□□□□ -1.58
HERC1-215ENST00000561436 PTPROQ16827 1216 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 TKFCQ3LXA3 575 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 CT47A1Q5JQC4 288 aaPredicted RBP5.2□□□□□ -1.58
HERC1-215ENST00000561436 ACBD5Q5T8D3 534 aaPredicted RBP5.2□□□□□ -1.58
HERC1-215ENST00000561436 FOXB2Q5VYV0 432 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 E4F1Q66K89 784 aaPredicted RBP5.2□□□□□ -1.58
HERC1-215ENST00000561436 PAQR3Q6TCH7 311 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 PLEKHO2Q8TD55 490 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 DCAF4Q8WV16 495 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 C1orf159Q96HA4 380 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 BRINP2Q9C0B6 783 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 INTS7Q9NVH2 962 aaKnown RBP5.2□□□□□ -1.58
HERC1-215ENST00000561436 MAGEC2Q9UBF1 373 aaPredicted RBP5.2□□□□□ -1.58
HERC1-215ENST00000561436 PPARGC1AQ9UBK2 798 aaKnown RBP5.2□□□□□ -1.58
HERC1-215ENST00000561436 PCDHA2Q9Y5H9 948 aa5.2□□□□□ -1.58
HERC1-215ENST00000561436 ADCY10Q96PN6 1610 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms