RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 B4GALNT3Q6L9W6 998 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 TRAF7Q6Q0C0 670 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 SPRED2Q7Z698 418 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 PDCD2LQ9BRP1 358 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 UBAC1Q9BSL1 405 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 RAPGEFL1Q9UHV5 662 aa13.77□□□□□ -0.21
CARMIL3-204ENST00000561354 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 ZBTB5O15062 677 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 RGS20O76081 388 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 ZNF286BP0CG31 522 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 TGFB3P10600 412 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 NUCB1Q02818 461 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 TCTN1Q2MV58 587 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 ZNF618Q5T7W0 954 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 TGS1Q96RS0 853 aaKnown RBP13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
CARMIL3-204ENST00000561354 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 PPP1R11O60927 126 aaPredicted RBP13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 LGR5O75473 907 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 PLA2G5P39877 138 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 TRAF1Q13077 416 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 MBTPS1Q14703 1052 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 PGM5Q15124 567 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 SEC23AQ15436 765 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 HSDL1Q3SXM5 330 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 SERINC5Q86VE9 423 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 WNT8BQ93098 351 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 COL4A4P53420 1690 aaPredicted RBP13.75□□□□□ -0.21
CARMIL3-204ENST00000561354 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 LINC01553A4QN01 128 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 GGPS1O95749 300 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 HIC1Q14526 733 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 GDPD5Q8WTR4 605 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 C16orf70Q9BSU1 422 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
CARMIL3-204ENST00000561354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 RSPH10B2B2RC85 870 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 IGHDP01880 384 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 RSPH10BP0C881 870 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 HOXC8P31273 242 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 SP2Q02086 613 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 DBF4BQ8NFT6 615 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 FAM122AQ96E09 287 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 RIOX1Q9H6W3 641 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 MTUS1Q9ULD2 1270 aa13.73□□□□□ -0.21
CARMIL3-204ENST00000561354 TRANK1O15050 2925 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 H3BRB1 525 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 AMHP03971 560 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 CCND2P30279 289 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 THPOP40225 353 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 PLEKHG4Q58EX7 1191 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 CYB5R4Q7L1T6 521 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 IL31RAQ8NI17 732 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 TUT1Q9H6E5 874 aaKnown RBP13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 MLXIPQ9HAP2 919 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 BDP1A6H8Y1 2624 aa13.72□□□□□ -0.21
CARMIL3-204ENST00000561354 SIP14410 1827 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 REV3LO60673 3130 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 CAND2O75155 1236 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 STAM2O75886 525 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 NEFLP07196 543 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 ICAM3P32942 547 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 TRDNQ13061 729 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 GRM4Q14833 912 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 SLC35G1Q2M3R5 365 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 TMEM31Q5JXX7 168 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 FAM117BQ6P1L5 589 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 ATP6V0A1Q93050 837 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 PIGSQ96S52 555 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 IL25Q9H293 177 aa13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 UBE2ZQ9H832 354 aaPredicted RBP13.71□□□□□ -0.21
CARMIL3-204ENST00000561354 XIRP2A4UGR9 3374 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 PNMA6FA0A0J9YX94 578 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 CYTH3O43739 400 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 SORBS3O60504 671 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 GPR37L1O60883 481 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms