RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 TSPY26PQ9H489 355 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 JADE2Q9NQC1 790 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 MORF4L1Q9UBU8 362 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 UBIAD1Q9Y5Z9 338 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 PLXNB2O15031 1838 aa11.6□□□□□ -0.55
USP3-219ENST00000561326 MCM3APO60318 1980 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 LCTP09848 1927 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 GOLGA6L3A6NEY3 463 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 IPO5O00410 1097 aaKnown RBP11.59□□□□□ -0.55
USP3-219ENST00000561326 SMC2O95347 1197 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 CAVIN2O95810 425 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 YY1P25490 414 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 AMPD3Q01432 767 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 MTMR1Q13613 665 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
USP3-219ENST00000561326 STXBP2Q15833 593 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 LRCH2Q5VUJ6 765 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 HAUS3Q68CZ6 603 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
USP3-219ENST00000561326 ANKRD13CQ8N6S4 541 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 LENG9Q96B70 501 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 PTPN18Q99952 460 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 NT5C3AQ9H0P0 336 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 MAGEF1Q9HAY2 307 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 TXNRD2Q9NNW7 524 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 DISC1Q9NRI5 854 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 TCEAL9Q9UHQ7 104 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 KDM3AQ9Y4C1 1321 aa11.59□□□□□ -0.55
USP3-219ENST00000561326 GAS7O60861 476 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 EIF3JO75822 258 aaKnown RBP11.58□□□□□ -0.56
USP3-219ENST00000561326 CDC25AP30304 524 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 MAPK4P31152 587 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 MRPS9P82933 396 aaKnown RBP11.58□□□□□ -0.56
USP3-219ENST00000561326 KARSQ15046 597 aaKnown RBP11.58□□□□□ -0.56
USP3-219ENST00000561326 TAF1CQ15572 869 aaPredicted RBP11.58□□□□□ -0.56
USP3-219ENST00000561326 FAM110CQ1W6H9 321 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
USP3-219ENST00000561326 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 ABRAQ8N0Z2 381 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 KCTD17Q8N5Z5 321 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 SNX29Q8TEQ0 813 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 GPRASP2Q96D09 838 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 TEKT3Q9BXF9 490 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 LRRC27Q9C0I9 530 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 KCNH7Q9NS40 1196 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
USP3-219ENST00000561326 POTEMA6NI47 508 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 PP2D1A8MPX8 630 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 ACTN4O43707 911 aaKnown RBP11.57□□□□□ -0.56
USP3-219ENST00000561326 PEX10O60683 326 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 PSMD10O75832 226 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 MYL1P05976 194 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 ARP10275 920 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 ITGB5P18084 799 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 CCT6AP40227 531 aaKnown RBP11.57□□□□□ -0.56
USP3-219ENST00000561326 TM4SF4P48230 202 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 TYRO3Q06418 890 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 PDE4DQ08499 809 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 POSTNQ15063 836 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 DEFB115Q30KQ5 88 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 NCAPH2Q6IBW4 605 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 OTOP1Q7RTM1 612 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 FAM133AQ8N9E0 248 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 IL31RAQ8NI17 732 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 SMARCE1Q969G3 411 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 ZFYVE28Q9HCC9 887 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 AGO4Q9HCK5 861 aaKnown RBP11.57□□□□□ -0.56
USP3-219ENST00000561326 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
USP3-219ENST00000561326 MYH11P35749 1972 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 A0A087X0B3 334 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 ASB14A6NK59 587 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 FAM155AB1AL88 458 aaPredicted RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 ALDH1A1P00352 501 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 PLCG1P19174 1290 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 MUTP22033 750 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 AFMP43652 599 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 ALDH5A1P51649 535 aaPredicted RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 NOGQ13253 232 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 SEMA3FQ13275 785 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 E2F4Q16254 413 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 STX1AQ16623 288 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 HYIQ5T013 277 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 L1TD1Q5T7N2 865 aaKnown RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 KCNV1Q6PIU1 500 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 SV2BQ7L1I2 683 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 CCDC47Q96A33 483 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms