RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 DDX11L8A8MPP1 907 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 KLRF2D3W0D1 207 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 IFIT3O14879 490 aaKnown RBP8.62□□□□□ -1.03
ZEB1-223ENST00000561304 CYTH3O43739 400 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 DHX16O60231 1041 aaKnown RBP8.62□□□□□ -1.03
ZEB1-223ENST00000561304 CD4P01730 458 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 RAG1P15918 1043 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 PDE4DQ08499 809 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 IQSEC1Q6DN90 963 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 DNERQ8NFT8 737 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 NCOA7Q8NI08 942 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 MYL10Q9BUA6 226 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 WDR11Q9BZH6 1224 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 AP5M1Q9H0R1 490 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 WDR81Q562E7 1941 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 MROH7Q68CQ1 1323 aa8.62□□□□□ -1.03
ZEB1-223ENST00000561304 LOC102724159A0A0B4J2E5 919 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 DCDC2CA8MYV0 355 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 B4GALT4O60513 344 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 TIMP1P01033 207 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 CLCN1P35523 988 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 PURAQ00577 322 aaKnown RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 FPGSQ05932 587 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 TROAPQ12815 778 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 TRDNQ13061 729 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 ITGA7Q13683 1181 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 WTAPQ15007 396 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 PPP2R5BQ15173 497 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 PWP2Q15269 919 aaKnown RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 FAM109BQ6ICB4 259 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 C16orf59Q7L2K0 433 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 RALYLQ86SE5 291 aaKnown RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 HOMER1Q86YM7 354 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 RGS22Q8NE09 1264 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 OR6J1Q8NGC5 347 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 GUCD1Q96NT3 240 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 PIGSQ96S52 555 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 TRPV6Q9H1D0 765 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 RIOX1Q9H6W3 641 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 LY9Q9HBG7 655 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 MTMR10Q9NXD2 777 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 Q9Y3F1 56 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 LOXHD1Q8IVV2 1947 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 KAT6AQ92794 2004 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 SLC27A2O14975 620 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 ZBTB5O15062 677 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 CFBP00751 764 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 MYL3P08590 195 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 CSF2RAP15509 400 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 EIF2AK2P19525 551 aaKnown RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 HOXA13P31271 388 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 CYP2C18P33260 490 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 HSD17B4P51659 736 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 GHRHRQ02643 423 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 TMEM67Q5HYA8 995 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 MFSD5Q6N075 450 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 CCDC62Q6P9F0 684 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 IL31RAQ8NI17 732 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 SCFD2Q8WU76 684 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 VWCEQ96DN2 955 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 AMNQ9BXJ7 453 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 WNT8AQ9H1J5 351 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 PXMP2Q9NR77 195 aa8.61□□□□□ -1.03
ZEB1-223ENST00000561304 MRPL11Q9Y3B7 192 aaKnown RBP8.61□□□□□ -1.03
ZEB1-223ENST00000561304 XIRP2A4UGR9 3374 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 MICAL3Q7RTP6 2002 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 MYO9BQ13459 2157 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 COL4A4P53420 1690 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 SH2B2O14492 632 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 PRC1O43663 620 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 PLEKHA8P1O95397 391 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 ACRP10323 421 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 TXNP10599 105 aaKnown RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 RXRAP19793 462 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 ARHGAP1Q07960 439 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 NECTIN1Q15223 517 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 LY6KQ17RY6 165 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 BMP2KLQ5H9B9 411 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 SEPT14Q6ZU15 432 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 CENPQQ7L2Z9 268 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 RAB11FIP4Q86YS3 637 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 ZNF654Q8IZM8 581 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 PIBF1Q8WXW3 757 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 RMDN3Q96TC7 470 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 NOC4LQ9BVI4 516 aaKnown RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 LRRC2Q9BYS8 371 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 ALDH8A1Q9H2A2 487 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 TTYH1Q9H313 450 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-223ENST00000561304 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms