RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ESR2Q92731 530 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 MAP3K20Q9NYL2 800 aaKnown RBP21.67■■□□□ 1.06
TPM1-226ENST00000560959 PRKAG3Q9UGI9 489 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 MRVI1Q9Y6F6 885 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 RSPH10B2B2RC85 870 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 H3BNC9 293 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 RSPH10BP0C881 870 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 CSPP1Q1MSJ5 1256 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 EPC2Q52LR7 807 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 PLEKHG4Q58EX7 1191 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 SERINC5Q86VE9 423 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 ADGRF4Q8IZF3 695 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 WNT8BQ93098 351 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 PABPC5Q96DU9 382 aaKnown RBP21.66■■□□□ 1.06
TPM1-226ENST00000560959 PXMP2Q9NR77 195 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
TPM1-226ENST00000560959 SIP14410 1827 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 DCXO43602 365 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 ZNF200P98182 395 aaPredicted RBP21.65■■□□□ 1.06
TPM1-226ENST00000560959 GHRHRQ02643 423 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 MYSM1Q5VVJ2 828 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 MYOCDQ8IZQ8 938 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 SAMD3Q8N6K7 520 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 BANK1Q8NDB2 785 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 TOP1MTQ969P6 601 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 FAM227BQ96M60 508 aa21.65■■□□□ 1.06
TPM1-226ENST00000560959 A0A0D9SFI3 127 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 NCK2O43639 380 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 CAND2O75155 1236 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 TGFB3P10600 412 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 HAND2P61296 217 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 ASPRV1Q53RT3 343 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 CELF3Q5SZQ8 465 aaKnown RBP21.64■■□□□ 1.05
TPM1-226ENST00000560959 FBXO11Q86XK2 927 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 PNMA1Q8ND90 353 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 CPVLQ9H3G5 476 aa21.64■■□□□ 1.05
TPM1-226ENST00000560959 C19orf67A6NJJ6 358 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 ZNF286BP0CG31 522 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 EIF2AK2P19525 551 aaKnown RBP21.63■■□□□ 1.05
TPM1-226ENST00000560959 HOXC8P31273 242 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 THPOP40225 353 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 HSD17B4P51659 736 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 HIC1Q14526 733 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 QRICH1Q2TAL8 776 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 IQCA1Q86XH1 822 aa21.63■■□□□ 1.05
TPM1-226ENST00000560959 ZBTB47Q9UFB7 747 aaPredicted RBP21.63■■□□□ 1.05
TPM1-226ENST00000560959 MRE11P49959 708 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 GPM6BQ13491 265 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 STOX1Q6ZVD7 989 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 TBC1D10CQ8IV04 446 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 SEPT8Q92599 483 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 SPATA33Q96N06 139 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 UIMC1Q96RL1 719 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 C16orf70Q9BSU1 422 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 UPF3BQ9BZI7 483 aaKnown RBP21.62■■□□□ 1.05
TPM1-226ENST00000560959 NSUN3Q9H649 340 aaKnown RBP21.62■■□□□ 1.05
TPM1-226ENST00000560959 KAT14Q9H8E8 782 aa21.62■■□□□ 1.05
TPM1-226ENST00000560959 CCDC171Q6TFL3 1326 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 KIAA1217Q5T5P2 1943 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 H3BQ06 376 aaPredicted RBP21.61■■□□□ 1.05
TPM1-226ENST00000560959 RGS20O76081 388 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 PDE1AP54750 535 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 MFAP1P55081 439 aaKnown RBP21.61■■□□□ 1.05
TPM1-226ENST00000560959 ZP2Q05996 745 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 HSDL1Q3SXM5 330 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 ZNF589Q86UQ0 364 aaPredicted RBP21.61■■□□□ 1.05
TPM1-226ENST00000560959 VSIG10LQ86VR7 867 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 ADHFE1Q8IWW8 467 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 TMEM192Q8IY95 271 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 YME1L1Q96TA2 773 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 PDCD2LQ9BRP1 358 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 ZKSCAN3Q9BRR0 538 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 JMJD4Q9H9V9 463 aa21.61■■□□□ 1.05
TPM1-226ENST00000560959 COL4A6Q14031 1691 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 C17orf102A2RUQ5 167 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 ZNF213O14771 459 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 CFBP00751 764 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 NHLH1Q02575 133 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 TCEAL5Q5H9L2 206 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 ATP6V0A1Q93050 837 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 AMNQ9BXJ7 453 aa21.6■■□□□ 1.05
TPM1-226ENST00000560959 PARP1P09874 1014 aaKnown RBP21.59■■□□□ 1.05
TPM1-226ENST00000560959 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
TPM1-226ENST00000560959 APBB2Q92870 758 aa21.59■■□□□ 1.05
TPM1-226ENST00000560959 NEDD4P46934 1319 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 C5orf67F2Z3F1 127 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 H3BRB1 525 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 OPLAHO14841 1288 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 GGPS1O95749 300 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 RB1P06400 928 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 NMIQ13287 307 aaPredicted RBP21.58■■□□□ 1.05
TPM1-226ENST00000560959 FBXL18Q96ME1 805 aa21.58■■□□□ 1.05
TPM1-226ENST00000560959 ZSCAN10Q96SZ4 725 aaPredicted RBP21.58■■□□□ 1.05
TPM1-226ENST00000560959 TUT1Q9H6E5 874 aaKnown RBP21.58■■□□□ 1.05
TPM1-226ENST00000560959 MICAL3Q7RTP6 2002 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.57■■□□□ 1.04
TPM1-226ENST00000560959 KDM4AO75164 1064 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 GNAT1P11488 350 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 SP2Q02086 613 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 CTC1Q2NKJ3 1217 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms