RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 DEXIO95424 95 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 HOXD8P13378 290 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 SYN1P17600 705 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 AP3B2Q13367 1082 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 LAMC2Q13753 1193 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 NPY5RQ15761 445 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 TRIM22Q8IYM9 498 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 CCDC12Q8WUD4 166 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 PDLIM7Q9NR12 457 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 SCN10AQ9Y5Y9 1956 aa17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 FIBPO43427 364 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 EDIL3O43854 480 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 KPNA6O60684 536 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 GGPS1O95749 300 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 MMP3P08254 477 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 FDPSP14324 419 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 SREBF1P36956 1147 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 PSMC6P62333 389 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 JAKMIP3Q5VZ66 844 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 DHX37Q8IY37 1157 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 VTI1AQ96AJ9 217 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 GPRASP2Q96D09 838 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 C6orf50Q9HD87 102 aa17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 RANBP2P49792 3224 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-213ENST00000560856 STK36Q9NRP7 1315 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 TRIM43BA6NCK2 446 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 ATP9AO75110 1047 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 MYL3P08590 195 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 GNA11P29992 359 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 FAAP100Q0VG06 881 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 ITGA7Q13683 1181 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 FAM126BQ8IXS8 530 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 PPTC7Q8NI37 304 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 CYP2W1Q8TAV3 490 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 KAT2BQ92831 832 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 TRIM43Q96BQ3 446 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 GDF15Q99988 308 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 SENP7Q9BQF6 1050 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 MTG1Q9BT17 334 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 JADE2Q9NQC1 790 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 TELO2Q9Y4R8 837 aa17.47■□□□□ 0.39
SNRPA1-213ENST00000560856 TRIOBPQ9H2D6 2365 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 M0R2N6 131 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 SORBS3O60504 671 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 PQBP1O60828 265 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 CDKL5O76039 1030 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 CD4P01730 458 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 CYP3A4P08684 503 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 KCNA2P16389 499 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 BRDTQ58F21 947 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 FAM177A1Q8N128 213 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 REXO1Q8N1G1 1221 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 MXRA8Q9BRK3 442 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 COLQQ9Y215 455 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-213ENST00000560856 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 CLTBP09497 229 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 ITGB8P26012 769 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 MAGEA10P43363 369 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 ARHGAP4P98171 946 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 NEDD9Q14511 834 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 METTL7BQ6UX53 244 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 SEZ6LQ9BYH1 1024 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 BACH2Q9BYV9 841 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 ORC3Q9UBD5 711 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 TBX21Q9UL17 535 aa17.45■□□□□ 0.38
SNRPA1-213ENST00000560856 DCDC2CA8MYV0 355 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 HAS3O00219 553 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 MEIS1O00470 390 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 MAFGO15525 162 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 PPFIA4O75335 1185 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 NLRP5P59047 1200 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 RABEP1Q15276 862 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 DGKDQ16760 1214 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 NBPF20Q3BBV1 942 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 CEP55Q53EZ4 464 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 CYFIP1Q7L576 1253 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 DAGLBQ8NCG7 672 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 BICD2Q8TD16 824 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 PPP1R13LQ8WUF5 828 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 CDHR1Q96JP9 859 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 SPATA33Q96N06 139 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 KCNH7Q9NS40 1196 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms