RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
GABPB1-210ENST00000560825 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
GABPB1-210ENST00000560825 LOXHD1Q8IVV2 1947 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 GCOM1H8Y6P7 765 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 HAS3O00219 553 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 DDAH1O94760 285 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 GGPS1O95749 300 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 POLR2MP0CAP2 368 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 NFRKBQ6P4R8 1299 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 EMID1Q96A84 441 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
GABPB1-210ENST00000560825 FAM217BQ9NTX9 383 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-210ENST00000560825 CNTNAP5Q8WYK1 1306 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 F2P00734 622 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 FGBP02675 491 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 HOXD8P13378 290 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-210ENST00000560825 LIFRP42702 1097 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 PSEN2P49810 448 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 FUT2Q10981 343 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 MBTPS1Q14703 1052 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 PTGISQ16647 500 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 PSRC1Q6PGN9 363 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-210ENST00000560825 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 TRIM50Q86XT4 487 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
GABPB1-210ENST00000560825 TMEM87BQ96K49 555 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 MPHOSPH6Q99547 160 aaKnown RBP12.92□□□□□ -0.34
GABPB1-210ENST00000560825 MAP3K14Q99558 947 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 NKX2-4Q9H2Z4 354 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 ZNF576Q9H609 170 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 WDR81Q562E7 1941 aa12.92□□□□□ -0.34
GABPB1-210ENST00000560825 MICAL3Q7RTP6 2002 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 ATP9AO75110 1047 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 PPFIA3O75145 1194 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 CDC27P30260 824 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 CCND2P30279 289 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 MFSD10Q14728 455 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 TRIM71Q2Q1W2 868 aaKnown RBP12.91□□□□□ -0.34
GABPB1-210ENST00000560825 APOA5Q6Q788 366 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 SGMS1Q86VZ5 419 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-210ENST00000560825 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 PGBD1Q96JS3 809 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 SPATA33Q96N06 139 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 INPP4AQ96PE3 977 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-210ENST00000560825 MAF1Q9H063 256 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
GABPB1-210ENST00000560825 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 B4DLN1 442 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 NBNO60934 754 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 CDC45O75419 566 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
GABPB1-210ENST00000560825 LAMC2Q13753 1193 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 DGKDQ16760 1214 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 WWC2Q6AWC2 1192 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 MAFAQ8NHW3 353 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-210ENST00000560825 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.34
GABPB1-210ENST00000560825 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 GTF2IRD1Q9UHL9 959 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 ATG2AQ2TAZ0 1938 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
GABPB1-210ENST00000560825 EPOPA6NHQ4 379 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 RFXAPO00287 272 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 KPNA6O60684 536 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 FOSL2P15408 326 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 ITGB5P18084 799 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
GABPB1-210ENST00000560825 SP4Q02446 784 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 CYP2W1Q8TAV3 490 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 ZBTB10Q96DT7 871 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
GABPB1-210ENST00000560825 PKD2L1Q9P0L9 805 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 SLC12A7Q9Y666 1083 aa12.89□□□□□ -0.35
GABPB1-210ENST00000560825 PIK3CDO00329 1044 aa12.88□□□□□ -0.35
GABPB1-210ENST00000560825 DTNBO60941 627 aa12.88□□□□□ -0.35
GABPB1-210ENST00000560825 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
GABPB1-210ENST00000560825 CKBP12277 381 aa12.88□□□□□ -0.35
GABPB1-210ENST00000560825 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-210ENST00000560825 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms