RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 EPN1Q9Y6I3 576 aaPredicted RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 BAZ2BQ9UIF8 2168 aaKnown RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 CASP8AP2Q9UKL3 1982 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 IFIT3O14879 490 aaKnown RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 CLGNO14967 610 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 NDUFA10O95299 355 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 RHOXF2BP0C7M4 288 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 CASP14P31944 242 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 KRT2P35908 639 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 PLA2G5P39877 138 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 AMPD2Q01433 879 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 KIF5AQ12840 1032 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 NFIAQ12857 509 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 MKRN3Q13064 507 aaKnown RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 CUL4BQ13620 913 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 WTAPQ15007 396 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 ZNF658Q5TYW1 1059 aaPredicted RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 ARL6IP4Q66PJ3 421 aaKnown RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 LRRC31Q6UY01 552 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 RAD9BQ6WBX8 426 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 ZNF572Q7Z3I7 529 aaPredicted RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 ANKRD13AQ8IZ07 590 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 MMGT1Q8N4V1 131 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 IGDCC4Q8TDY8 1250 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 CLMNQ96JQ2 1002 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 TRERF1Q96PN7 1200 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 RHOXF2Q9BQY4 288 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 UBAC1Q9BSL1 405 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 DESI2Q9BSY9 194 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 PAGR1Q9BTK6 254 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 IDI2Q9BXS1 227 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 NUCKS1Q9H1E3 243 aaKnown RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 DHX36Q9H2U1 1008 aaKnown RBP9.49□□□□□ -0.89
CCDC33-209ENST00000560565 HPCAL4Q9UM19 191 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 FLT1P17948 1338 aa9.49□□□□□ -0.89
CCDC33-209ENST00000560565 A0A1W2PQJ5 194 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 GOLGA6L10A6NI86 522 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 H0YHG0 523 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 PSMA7O14818 248 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 EIF3HO15372 352 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC33-209ENST00000560565 TRPA1O75762 1119 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 ZBTB48P10074 688 aaPredicted RBP9.48□□□□□ -0.89
CCDC33-209ENST00000560565 KRT9P35527 623 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 LONP1P36776 959 aaKnown RBP9.48□□□□□ -0.89
CCDC33-209ENST00000560565 VAV2P52735 878 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 COPB1P53618 953 aaKnown RBP9.48□□□□□ -0.89
CCDC33-209ENST00000560565 IFFO1Q0D2I5 559 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 SREBF2Q12772 1141 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 DPYDQ12882 1025 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 KCNB1Q14721 858 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 NTRK3Q16288 839 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 CCDC122Q5T0U0 273 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 FKBP15Q5T1M5 1219 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 DCAF15Q66K64 600 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 OTUD7BQ6GQQ9 843 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 CYB5R4Q7L1T6 521 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 CHST3Q7LGC8 479 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 MICU3Q86XE3 530 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 TEX2Q8IWB9 1127 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 PNKPQ96T60 521 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 DNAJC7Q99615 494 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 EHD4Q9H223 541 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 ACTR5Q9H9F9 607 aaPredicted RBP9.48□□□□□ -0.89
CCDC33-209ENST00000560565 LY9Q9HBG7 655 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 TOMM22Q9NS69 142 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 TCP11L1Q9NUJ3 509 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 RNF186Q9NXI6 227 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 SAGE1Q9NXZ1 904 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 FAM198AQ9UFP1 575 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 CAPN11Q9UMQ6 739 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 CSADQ9Y600 493 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 ABCB11O95342 1321 aa9.48□□□□□ -0.89
CCDC33-209ENST00000560565 A0A087WWV3 80 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 KCNJ18B7U540 433 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 LAD1O00515 517 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 TRIM66O15016 1216 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 ENTPD3O75355 529 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 PRPF6O94906 941 aaKnown RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 GYPCP04921 128 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 HLA-DOAP06340 250 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 CALML3P27482 149 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 TM4SF4P48230 202 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 INHBEP58166 350 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 SKOR1P84550 965 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 LMNB2Q03252 620 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 KCNJ12Q14500 433 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 TCP11X2Q5H9J9 407 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 RRP12Q5JTH9 1297 aaKnown RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 CCDC181Q5TID7 509 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 CCNI2Q6ZMN8 369 aaPredicted RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 C16orf86Q6ZW13 317 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 MIGA2Q7L4E1 593 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms