RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
NEDD8-208ENST00000560427 ITGB5P18084 799 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 UBA1P22314 1058 aaKnown RBP14.83□□□□□ -0.04
NEDD8-208ENST00000560427 ACLYP53396 1101 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 SETQ01105 290 aaPredicted RBP14.83□□□□□ -0.04
NEDD8-208ENST00000560427 ARHGAP1Q07960 439 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 MTMR1Q13613 665 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 LAMC2Q13753 1193 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 NPY5RQ15761 445 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 CEP55Q53EZ4 464 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 FAM184AQ8NB25 1140 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 MXRA8Q9BRK3 442 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 SEZ6LQ9BYH1 1024 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 POLR3EQ9NVU0 708 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 ELP1O95163 1332 aa14.83□□□□□ -0.04
NEDD8-208ENST00000560427 MYADML2A6NDP7 307 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 MMP1P03956 469 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 ASGR1P07306 291 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 KRT2P35908 639 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 USP11P51784 963 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 KCNA10Q16322 511 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 LY6KQ17RY6 165 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 CELF3Q5SZQ8 465 aaKnown RBP14.82□□□□□ -0.04
NEDD8-208ENST00000560427 C1orf53Q5VUE5 145 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 METTL7BQ6UX53 244 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 DHX37Q8IY37 1157 aaKnown RBP14.82□□□□□ -0.04
NEDD8-208ENST00000560427 PPTC7Q8NI37 304 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 PGBD1Q96JS3 809 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 GLT1D1Q96MS3 346 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 SENP6Q9GZR1 1112 aaPredicted RBP14.82□□□□□ -0.04
NEDD8-208ENST00000560427 RTEL1Q9NZ71 1219 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 KCNJ14Q9UNX9 436 aa14.82□□□□□ -0.04
NEDD8-208ENST00000560427 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.82□□□□□ -0.04
NEDD8-208ENST00000560427 CCDC194A0A1B0GVG4 234 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 A0A1W2PQ45 241 aaPredicted RBP14.81□□□□□ -0.04
NEDD8-208ENST00000560427 A0A1W2PQY0 241 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 MEIS1O00470 390 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 GGPS1O95749 300 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 CIITAP33076 1130 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 ZNF76P36508 570 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 SEMA3FQ13275 785 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 SNX17Q15036 470 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 NONOQ15233 471 aaKnown RBP eCLIP14.81□□□□□ -0.04
NEDD8-208ENST00000560427 TMEM63BQ5T3F8 832 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 RASGRP4Q8TDF6 673 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 C8orf76Q96K31 380 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 STARD7Q9NQZ5 370 aa14.81□□□□□ -0.04
NEDD8-208ENST00000560427 ADAMTS3O15072 1205 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 MMP3P08254 477 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 HOXD8P13378 290 aaPredicted RBP14.8□□□□□ -0.04
NEDD8-208ENST00000560427 KCNA2P16389 499 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 BEX3Q00994 111 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 CUL4AQ13619 759 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 SAFBQ15424 915 aaKnown RBP eCLIP14.8□□□□□ -0.04
NEDD8-208ENST00000560427 DGKDQ16760 1214 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 MYSM1Q5VVJ2 828 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 KRT40Q6A162 431 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 MOXD1Q6UVY6 613 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 COPS5Q92905 334 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 SNX21Q969T3 373 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 NAP1L4Q99733 375 aaKnown RBP14.8□□□□□ -0.04
NEDD8-208ENST00000560427 MLXIPQ9HAP2 919 aa14.8□□□□□ -0.04
NEDD8-208ENST00000560427 IGLV3-22A0A075B6J6 115 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 A0A0U1RQG5 324 aaPredicted RBP14.79□□□□□ -0.04
NEDD8-208ENST00000560427 FAM86B1E9PN63 330 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 NFASCO94856 1347 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 FAM86B2P0C5J1 330 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 PURAQ00577 322 aaKnown RBP14.79□□□□□ -0.04
NEDD8-208ENST00000560427 SP2Q02086 613 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 MROH7Q68CQ1 1323 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 FBXO18Q8NFZ0 1043 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 TBCKQ8TEA7 893 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 AFG1LQ8WV93 481 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 ZFP91Q96JP5 570 aaPredicted RBP14.79□□□□□ -0.04
NEDD8-208ENST00000560427 SPATA33Q96N06 139 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 MTG1Q9BT17 334 aaPredicted RBP14.79□□□□□ -0.04
NEDD8-208ENST00000560427 KCNH7Q9NS40 1196 aa14.79□□□□□ -0.04
NEDD8-208ENST00000560427 NOP56O00567 594 aaKnown RBP14.78□□□□□ -0.04
NEDD8-208ENST00000560427 PPFIA4O75335 1185 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 GCFC2P16383 781 aaKnown RBP14.78□□□□□ -0.04
NEDD8-208ENST00000560427 PTGS1P23219 599 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 CXCL17Q6UXB2 119 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 SLC39A5Q6ZMH5 540 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 NEK8Q86SG6 692 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 PLA2G4DQ86XP0 818 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 DIS3L2Q8IYB7 885 aaKnown RBP14.78□□□□□ -0.04
NEDD8-208ENST00000560427 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 KATNAL1Q9BW62 490 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 GJB4Q9NTQ9 266 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 SMC3Q9UQE7 1217 aa14.78□□□□□ -0.04
NEDD8-208ENST00000560427 CYP3A7-CYP3A51PA0A087WV96 503 aa14.77□□□□□ -0.05
NEDD8-208ENST00000560427 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.05
NEDD8-208ENST00000560427 CYP3A7P24462 503 aa14.77□□□□□ -0.05
NEDD8-208ENST00000560427 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.05
NEDD8-208ENST00000560427 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.05
NEDD8-208ENST00000560427 HSDL1Q3SXM5 330 aa14.77□□□□□ -0.05
NEDD8-208ENST00000560427 Q4G0T1 1027 aa14.77□□□□□ -0.05
NEDD8-208ENST00000560427 PPP4R3AQ6IN85 833 aa14.77□□□□□ -0.05
NEDD8-208ENST00000560427 CYFIP1Q7L576 1253 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms