RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
IRF9-209ENST00000560365 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 DBF4BQ8NFT6 615 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 SEPT8Q92599 483 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 SPATA33Q96N06 139 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 PRKAG3Q9UGI9 489 aa13.53□□□□□ -0.24
IRF9-209ENST00000560365 C17orf102A2RUQ5 167 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 HAS3O00219 553 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 NCK2O43639 380 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 UPP2O95045 317 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 MYCLP12524 364 aaPredicted RBP13.52□□□□□ -0.25
IRF9-209ENST00000560365 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
IRF9-209ENST00000560365 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 PABPC5Q96DU9 382 aaKnown RBP13.52□□□□□ -0.25
IRF9-209ENST00000560365 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 PXMP2Q9NR77 195 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 COL20A1Q9P218 1284 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 CCDC171Q6TFL3 1326 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 LCTP09848 1927 aa13.52□□□□□ -0.25
IRF9-209ENST00000560365 NCOR1O75376 2440 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 H3BNC9 293 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 GGPS1O95749 300 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 GNAT1P11488 350 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 MRE11P49959 708 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 TCTN1Q2MV58 587 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 DIEXFQ68CQ4 756 aaKnown RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 SERINC5Q86VE9 423 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 POP1Q99575 1024 aaKnown RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 CLDND1Q9NY35 253 aa13.51□□□□□ -0.25
IRF9-209ENST00000560365 MAP3K20Q9NYL2 800 aaKnown RBP13.51□□□□□ -0.25
IRF9-209ENST00000560365 NOP56O00567 594 aaKnown RBP13.5□□□□□ -0.25
IRF9-209ENST00000560365 SORBS3O60504 671 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 CAND2O75155 1236 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 TGFB3P10600 412 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 TRAF1Q13077 416 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 MBTPS1Q14703 1052 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
IRF9-209ENST00000560365 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 TRAF7Q6Q0C0 670 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 TBC1D10CQ8IV04 446 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 APBB2Q92870 758 aa13.5□□□□□ -0.25
IRF9-209ENST00000560365 IFIH1Q9BYX4 1025 aaKnown RBP13.5□□□□□ -0.25
IRF9-209ENST00000560365 NEDD4P46934 1319 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 H3BRB1 525 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 KDM4AO75164 1064 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 CCND2P30279 289 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 PDE1AP54750 535 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
IRF9-209ENST00000560365 HSDL1Q3SXM5 330 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 ZNF589Q86UQ0 364 aaPredicted RBP13.49□□□□□ -0.25
IRF9-209ENST00000560365 ADHFE1Q8IWW8 467 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 WNT8BQ93098 351 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 TOP1MTQ969P6 601 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 RILPL2Q969X0 211 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 ZSCAN10Q96SZ4 725 aaPredicted RBP13.49□□□□□ -0.25
IRF9-209ENST00000560365 PDCD2LQ9BRP1 358 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 TUT1Q9H6E5 874 aaKnown RBP13.49□□□□□ -0.25
IRF9-209ENST00000560365 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
IRF9-209ENST00000560365 SALL3Q9BXA9 1300 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 CTSHP09668 335 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
IRF9-209ENST00000560365 CTNNB1P35222 781 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 HSD17B4P51659 736 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 NHLH1Q02575 133 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 ZP2Q05996 745 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 FIBCD1Q8N539 461 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 SAMD3Q8N6K7 520 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 IL17RAQ96F46 866 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
IRF9-209ENST00000560365 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
IRF9-209ENST00000560365 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
IRF9-209ENST00000560365 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
IRF9-209ENST00000560365 RB1P06400 928 aa13.47□□□□□ -0.25
IRF9-209ENST00000560365 SMIM10L2AP0DMW4 78 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms