RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 SENP7Q9BQF6 1050 aa13.93□□□□□ -0.18
USP8-209ENST00000560297 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
USP8-209ENST00000560297 DDX25Q9UHL0 483 aaKnown RBP13.93□□□□□ -0.18
USP8-209ENST00000560297 Q9Y3F1 56 aa13.93□□□□□ -0.18
USP8-209ENST00000560297 MRVI1Q9Y6F6 885 aa13.93□□□□□ -0.18
USP8-209ENST00000560297 IGLV3-22A0A075B6J6 115 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 FAM205CA6NFA0 338 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
USP8-209ENST00000560297 ADCYAP1R1P41586 468 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 NEDD9Q14511 834 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 DUSP28Q4G0W2 176 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 PRR16Q569H4 304 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 CCDC62Q6P9F0 684 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 CYP2W1Q8TAV3 490 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 KCNH7Q9NS40 1196 aa13.92□□□□□ -0.18
USP8-209ENST00000560297 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
USP8-209ENST00000560297 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
USP8-209ENST00000560297 DUSP11O75319 330 aaKnown RBP13.91□□□□□ -0.18
USP8-209ENST00000560297 BRD1O95696 1058 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 RARBP10826 455 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 CCL5P13501 91 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 CAPN2P17655 700 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 CCND3P30281 292 aaPredicted RBP13.91□□□□□ -0.18
USP8-209ENST00000560297 DDIT3P35638 169 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 RESTQ13127 1097 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 RNF208Q9H0X6 261 aa13.91□□□□□ -0.18
USP8-209ENST00000560297 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
USP8-209ENST00000560297 TBX3O15119 743 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 TDP2O95551 362 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 F13A1P00488 732 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 ARP10275 920 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 SMPD1P17405 629 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 TOB1P50616 345 aaPredicted RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 LAMC2Q13753 1193 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 LY6KQ17RY6 165 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 COL13A1Q5TAT6 717 aaPredicted RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 LENG9Q96B70 501 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 FAM20AQ96MK3 541 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 ZNF577Q9BSK1 485 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP8-209ENST00000560297 UNC93B1Q9H1C4 597 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 TBC1D22BQ9NU19 505 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 ATP6V1DQ9Y5K8 247 aa13.9□□□□□ -0.18
USP8-209ENST00000560297 RBBP6Q7Z6E9 1792 aaKnown RBP13.9□□□□□ -0.18
USP8-209ENST00000560297 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.89□□□□□ -0.19
USP8-209ENST00000560297 IPO5O00410 1097 aaKnown RBP13.89□□□□□ -0.19
USP8-209ENST00000560297 MARCH6O60337 910 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 NEMFO60524 1076 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 BMP15O95972 392 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 GH1P01241 217 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 GJB1P08034 283 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 MCM7P33993 719 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 SP2Q02086 613 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 SEMA3FQ13275 785 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 PKP1Q13835 747 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 MTFR1Q15390 333 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 ZNF174Q15697 407 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
USP8-209ENST00000560297 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
USP8-209ENST00000560297 SLFN12Q8IYM2 578 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
USP8-209ENST00000560297 ZNF396Q96N95 335 aaPredicted RBP13.89□□□□□ -0.19
USP8-209ENST00000560297 RIT2Q99578 217 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 SDF4Q9BRK5 362 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 AP5M1Q9H0R1 490 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 CEP131Q9UPN4 1083 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 NFASCO94856 1347 aa13.89□□□□□ -0.19
USP8-209ENST00000560297 LCTP09848 1927 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 LAD1O00515 517 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 MSH4O15457 936 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 DYNC1LI2O43237 492 aaPredicted RBP13.88□□□□□ -0.19
USP8-209ENST00000560297 SLC37A4O43826 429 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 ATP9AO75110 1047 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 ARIH2O95376 493 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 KCNA2P16389 499 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 UBA1P22314 1058 aaKnown RBP13.88□□□□□ -0.19
USP8-209ENST00000560297 NKX3-2P78367 333 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 CALCRLQ16602 461 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 BRDTQ58F21 947 aaPredicted RBP13.88□□□□□ -0.19
USP8-209ENST00000560297 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
USP8-209ENST00000560297 LHX8Q68G74 356 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 METTL7BQ6UX53 244 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
USP8-209ENST00000560297 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
USP8-209ENST00000560297 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.88□□□□□ -0.19
USP8-209ENST00000560297 ZDHHC9Q9Y397 364 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms