RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 TSEN34Q9BSV6 310 aaKnown RBP9.78□□□□□ -0.84
USP3-217ENST00000560070 GLT8D2Q9H1C3 349 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 Q9Y3F1 56 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 TELO2Q9Y4R8 837 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 NR2E3Q9Y5X4 410 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 PLXNB2O15031 1838 aa9.77□□□□□ -0.84
USP3-217ENST00000560070 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 PQBP1O60828 265 aaKnown RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 ATP9AO75110 1047 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 CD2BP2O95400 341 aaKnown RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 ARP10275 920 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 CPT1AP50416 773 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 ARHGAP4P98171 946 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 TLE2Q04725 743 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 ARHGAP1Q07960 439 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 SEMA3FQ13275 785 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 BRDTQ58F21 947 aaPredicted RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 FAM47CQ5HY64 1035 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 CELF3Q5SZQ8 465 aaKnown RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 UTP14CQ5TAP6 766 aaKnown RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 XRRA1Q6P2D8 792 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 BLIDQ8IZY5 108 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 BICD2Q8TD16 824 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 INPP4AQ96PE3 977 aaPredicted RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 MXRA8Q9BRK3 442 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 PRDM5Q9NQX1 630 aaPredicted RBP9.77□□□□□ -0.85
USP3-217ENST00000560070 SH3GLB2Q9NR46 395 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 PCDHA4Q9UN74 947 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 UBIAD1Q9Y5Z9 338 aa9.77□□□□□ -0.85
USP3-217ENST00000560070 ESYT2A0FGR8 921 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 FIBPO43427 364 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 STAM2O75886 525 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 TGFB3P10600 412 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 XBP1P17861 261 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 UBA1P22314 1058 aaKnown RBP9.76□□□□□ -0.85
USP3-217ENST00000560070 CST5P28325 142 aaPredicted RBP9.76□□□□□ -0.85
USP3-217ENST00000560070 AP3B2Q13367 1082 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 MTMR1Q13613 665 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 ITGA7Q13683 1181 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 NBPF20Q3BBV1 942 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 HSDL1Q3SXM5 330 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 KCNV1Q6PIU1 500 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 PLA2G4DQ86XP0 818 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 WASF1Q92558 559 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 HTTP42858 3142 aa9.76□□□□□ -0.85
USP3-217ENST00000560070 A0A0U1RQG5 324 aaPredicted RBP9.75□□□□□ -0.85
USP3-217ENST00000560070 A6NJR5 290 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 DDX39AO00148 427 aaKnown RBP9.75□□□□□ -0.85
USP3-217ENST00000560070 ARVCFO00192 962 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 MMP3P08254 477 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 ZNF286BP0CG31 522 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 ICAM3P32942 547 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 SREBF1P36956 1147 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 NKX3-2P78367 333 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 PURAQ00577 322 aaKnown RBP9.75□□□□□ -0.85
USP3-217ENST00000560070 TRIM29Q14134 588 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 NEDD9Q14511 834 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 CEP55Q53EZ4 464 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 PRR16Q569H4 304 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 MCTP2Q6DN12 878 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 SH3RF1Q7Z6J0 888 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 FAM184AQ8NB25 1140 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 TBCKQ8TEA7 893 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 GPRASP2Q96D09 838 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 MTG1Q9BT17 334 aaPredicted RBP9.75□□□□□ -0.85
USP3-217ENST00000560070 PHF20Q9BVI0 1012 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 TRPV6Q9H1D0 765 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 SH2B1Q9NRF2 756 aaPredicted RBP9.75□□□□□ -0.85
USP3-217ENST00000560070 GRIN2DO15399 1336 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 FRMPD4Q14CM0 1322 aa9.75□□□□□ -0.85
USP3-217ENST00000560070 TRIM43BA6NCK2 446 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 FAM86B1E9PN63 330 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 MEIS1O00470 390 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 NOP56O00567 594 aaKnown RBP9.74□□□□□ -0.85
USP3-217ENST00000560070 EDIL3O43854 480 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 CABYRO75952 493 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 FAM86B2P0C5J1 330 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 CDK7P50613 346 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
USP3-217ENST00000560070 NR5A1Q13285 461 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 NPY5RQ15761 445 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 DGKDQ16760 1214 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 INF2Q27J81 1249 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 EARS2Q5JPH6 523 aaKnown RBP9.74□□□□□ -0.85
USP3-217ENST00000560070 KRT40Q6A162 431 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 PIK3AP1Q6ZUJ8 805 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 PPTC7Q8NI37 304 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 GJA10Q969M2 543 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 TRIM43Q96BQ3 446 aaPredicted RBP9.74□□□□□ -0.85
USP3-217ENST00000560070 AGO4Q9HCK5 861 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms