RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
USP3-215ENST00000559771 DYRK3O43781 588 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 HYAL3O43820 417 aaPredicted RBP6.91□□□□□ -1.3
USP3-215ENST00000559771 RAD21O60216 631 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 PQBP1O60828 265 aaKnown RBP6.91□□□□□ -1.3
USP3-215ENST00000559771 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
USP3-215ENST00000559771 CST5P28325 142 aaPredicted RBP6.91□□□□□ -1.3
USP3-215ENST00000559771 COPB2P35606 906 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 NOVP48745 357 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 NKX3-2P78367 333 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 CNTN2Q02246 1040 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 ACVR2BQ13705 512 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 KCNA10Q16322 511 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 TMEM63BQ5T3F8 832 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 RNF180Q86T96 592 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 AMOTL1Q8IY63 956 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 CPXCR1Q8N123 301 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 FAM133AQ8N9E0 248 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 MYLIPQ8WY64 445 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 DDRGK1Q96HY6 314 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 CHMP4BQ9H444 224 aaKnown RBP6.91□□□□□ -1.3
USP3-215ENST00000559771 MKNK2Q9HBH9 465 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 IL17RBQ9NRM6 502 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 SYNPO2Q9UMS6 1093 aa6.91□□□□□ -1.3
USP3-215ENST00000559771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
USP3-215ENST00000559771 GBF1Q92538 1859 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.9□□□□□ -1.3
USP3-215ENST00000559771 MOXD2PA6NHM9 499 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 NMT2O60551 498 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 TTLL1O95922 423 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 ASGR1P07306 291 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 ZFYP08048 801 aaPredicted RBP6.9□□□□□ -1.3
USP3-215ENST00000559771 BMP3P12645 472 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 GNAT2P19087 354 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 TDO2P48775 406 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 OAZ1P54368 228 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 GJA9P57773 515 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 TFAP4Q01664 338 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 SLFN13Q68D06 897 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 MCTP1Q6DN14 999 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 ARMCX2Q7L311 632 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 EDARADDQ8WWZ3 215 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 CHMP4CQ96CF2 233 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 DDX11Q96FC9 970 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.33e-6■□□□□ 10.1
USP3-215ENST00000559771 STARD7Q9NQZ5 370 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
USP3-215ENST00000559771 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 ZHX1Q9UKY1 873 aaPredicted RBP6.9□□□□□ -1.3
USP3-215ENST00000559771 FAM184BQ9ULE4 1060 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 GNEQ9Y223 722 aaKnown RBP6.9□□□□□ -1.3
USP3-215ENST00000559771 CNPY2Q9Y2B0 182 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 GRIN2DO15399 1336 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 TTC41PQ6P2S7 1318 aa6.9□□□□□ -1.3
USP3-215ENST00000559771 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 TMEM232C9JQI7 657 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 GNB5O14775 395 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 ZBED4O75132 1171 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 TIMP1P01033 207 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 CD4P01730 458 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 APPP05067 770 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 FGRP09769 529 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 RAG1P15918 1043 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 RHOQP17081 205 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 GATA4P43694 442 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 SNAP25P60880 206 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 FPGSQ05932 587 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 CTDSPL2Q05D32 466 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 PPARAQ07869 468 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 CCDC129Q6ZRS4 1044 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 FAM126BQ8IXS8 530 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 ZNF444Q8N0Y2 327 aaPredicted RBP6.89□□□□□ -1.31
USP3-215ENST00000559771 USP38Q8NB14 1042 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 SLC43A3Q8NBI5 491 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 CHST13Q8NET6 341 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 MAFAQ8NHW3 353 aaPredicted RBP6.89□□□□□ -1.31
USP3-215ENST00000559771 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
USP3-215ENST00000559771 ABHD16BQ9H3Z7 469 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 A1CFQ9NQ94 594 aaKnown RBP6.89□□□□□ -1.31
USP3-215ENST00000559771 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 TMEM39AQ9NV64 488 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
USP3-215ENST00000559771 ELP1O95163 1332 aa6.89□□□□□ -1.31
USP3-215ENST00000559771 UMODL1Q5DID0 1318 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 GRXCR1A8MXD5 290 aa6.88□□□□□ -1.31
USP3-215ENST00000559771 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms