RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 LRRC14Q15048 493 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 GORABQ5T7V8 394 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 VSIG10LQ86VR7 867 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 CNTROBQ8N137 903 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 VGLL2Q8N8G2 317 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 GRIN3AQ8TCU5 1115 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 CELF1Q92879 486 aaKnown RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 BOLA2Q9H3K6 86 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 UPF2Q9HAU5 1272 aaKnown RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 ADGRE2Q9UHX3 823 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 TAF1P21675 1872 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 AK9Q5TCS8 1911 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 COL4A1P02462 1669 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 NRXN2Q9P2S2 1712 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 PAGE1O75459 146 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 SLC5A1P13866 664 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 ATP5JP18859 108 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 ADORA1P30542 326 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 MFAP1P55081 439 aaKnown RBP8.31□□□□□ -1.08
ZEB1-216ENST00000559496 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
ZEB1-216ENST00000559496 CHRNDQ07001 517 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 CDK5R2Q13319 367 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 CRY2Q49AN0 593 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 DNTTIP2Q5QJE6 756 aaKnown RBP8.31□□□□□ -1.08
ZEB1-216ENST00000559496 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 RNF214Q8ND24 703 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 YY1AP1Q9H869 796 aa8.31□□□□□ -1.08
ZEB1-216ENST00000559496 FBXO24O75426 580 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 TAF5LO75529 589 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
ZEB1-216ENST00000559496 IFIT1P09914 478 aaKnown RBP8.3□□□□□ -1.08
ZEB1-216ENST00000559496 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 GRAPQ13588 217 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 HS1BP3Q53T59 392 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 CCDC158Q5M9N0 1113 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 TTC39AQ5SRH9 613 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 GRAPLQ8TC17 118 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-216ENST00000559496 LPIN2Q92539 896 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 EVI5LQ96CN4 794 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 RBM17Q96I25 401 aaKnown RBP8.3□□□□□ -1.08
ZEB1-216ENST00000559496 HAUS7Q99871 368 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 BRIP1Q9BX63 1249 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 SSU72Q9NP77 194 aaKnown RBP8.3□□□□□ -1.08
ZEB1-216ENST00000559496 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 ANKRD31Q8N7Z5 1873 aa8.3□□□□□ -1.08
ZEB1-216ENST00000559496 ARAP2Q8WZ64 1704 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 A0A1B0GUL6 1792 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 PAX4O43316 350 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 FGFR2P21802 821 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 CHMLP26374 656 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 COL19A1Q14993 1142 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 ZSCAN30Q86W11 494 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.29□□□□□ -1.08
ZEB1-216ENST00000559496 ISL2Q96A47 359 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 ANKRD2Q9GZV1 360 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 TSPYL1Q9H0U9 437 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
ZEB1-216ENST00000559496 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
ZEB1-216ENST00000559496 SNAP23O00161 211 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 USP17L7P0C7H9 530 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 PDE6BP35913 854 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 KCNJ4P48050 445 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 BECN1Q14457 450 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 LLGL2Q6P1M3 1020 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
ZEB1-216ENST00000559496 TP53INP2Q8IXH6 220 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 CRAMP1Q96RY5 1269 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 FSD1Q9BTV5 496 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 PDGFDQ9GZP0 370 aaPredicted RBP8.28□□□□□ -1.08
ZEB1-216ENST00000559496 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
ZEB1-216ENST00000559496 HIP1O00291 1037 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 GOLIM4O00461 696 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 PRPF40AO75400 957 aaKnown RBP8.27□□□□□ -1.09
ZEB1-216ENST00000559496 BBOX1O75936 387 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 REC8O95072 547 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 UQCRFS1P1P0C7P4 283 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 NPR1P16066 1061 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 GNA15P30679 374 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 PHKA1P46020 1223 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 UBE4AQ14139 1066 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 SND1Q7KZF4 910 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZEB1-216ENST00000559496 SV2BQ7L1I2 683 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 EDC3Q96F86 508 aaKnown RBP8.27□□□□□ -1.09
ZEB1-216ENST00000559496 GRPEL1Q9HAV7 217 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 PAG1Q9NWQ8 432 aa8.27□□□□□ -1.09
ZEB1-216ENST00000559496 RFX7Q2KHR2 1363 aa8.26□□□□□ -1.09
ZEB1-216ENST00000559496 SRGNP10124 158 aa8.26□□□□□ -1.09
ZEB1-216ENST00000559496 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
ZEB1-216ENST00000559496 RING1Q06587 406 aa8.26□□□□□ -1.09
ZEB1-216ENST00000559496 CCDC173Q0VFZ6 552 aa8.26□□□□□ -1.09
ZEB1-216ENST00000559496 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
ZEB1-216ENST00000559496 CBLL1Q75N03 491 aa8.26□□□□□ -1.09
ZEB1-216ENST00000559496 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms