RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 CALCRLQ16602 461 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 ANO1Q5XXA6 986 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 ATL3Q6DD88 541 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 FBXO46Q6PJ61 603 aaPredicted RBP7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 CYP2W1Q8TAV3 490 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 CHAMP1Q96JM3 812 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 USP28Q96RU2 1077 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 ZNF577Q9BSK1 485 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 WDR11Q9BZH6 1224 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 CFAP45Q9UL16 551 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 FAM184BQ9ULE4 1060 aa7.47□□□□□ -1.21
CHRNA3-204ENST00000559002 LCTP09848 1927 aa7.46□□□□□ -1.21
CHRNA3-204ENST00000559002 CASP8AP2Q9UKL3 1982 aa7.46□□□□□ -1.21
CHRNA3-204ENST00000559002 SPATA31C2B4DYI2 1134 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 IPO5O00410 1097 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 LAD1O00515 517 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 WNT7AO00755 349 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TBX3O15119 743 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 NKRFO15226 690 aaKnown RBP eCLIP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 MSH4O15457 936 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 EDIL3O43854 480 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 GAS7O60861 476 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 RGS20O76081 388 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 GGPS1O95749 300 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 ZNF865P0CJ78 1059 aaPredicted RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 ARP10275 920 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TGFB3P10600 412 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 AKR1A1P14550 325 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 UBA1P22314 1058 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 ICAM3P32942 547 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 ADCYAP1R1P41586 468 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TNFAIP2Q03169 654 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 DNM1Q05193 864 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TRIM32Q13049 653 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 PTGDRQ13258 359 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 NEDD9Q14511 834 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TMEM266Q2M3C6 531 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 CCDC144BQ3MJ40 725 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 PRAMEF19Q5SWL8 479 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 LRCH2Q5VUJ6 765 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TAPT1Q6NXT6 567 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 GIMAP8Q8ND71 665 aaPredicted RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 SH3TC2Q8TF17 1288 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 LENG9Q96B70 501 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 MBOAT7Q96N66 472 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 UIMC1Q96RL1 719 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 SDF4Q9BRK5 362 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TEKT3Q9BXF9 490 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 FTOQ9C0B1 505 aaKnown RBP eCLIP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 KATNBL1Q9H079 304 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 MLXIPQ9HAP2 919 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 AGO4Q9HCK5 861 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 HMX1Q9NP08 348 aaPredicted RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 KCNMB3Q9NPA1 279 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 PDGFCQ9NRA1 345 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TBC1D22BQ9NU19 505 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 POLR3EQ9NVU0 708 aa7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 TFIP11Q9UBB9 837 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-204ENST00000559002 HTTP42858 3142 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 PLXNA1Q9UIW2 1896 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 RBM47A0AV96 593 aaKnown RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 DDX39AO00148 427 aaKnown RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SEPT4O43236 478 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SORBS3O60504 671 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 ARIH2O95376 493 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 YEATS4O95619 227 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 GH1P01241 217 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 IGHA2P01877 340 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 RARBP10826 455 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 KCNA2P16389 499 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 CCND3P30281 292 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 TXKP42681 527 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 ATP2C1P98194 919 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SP4Q02446 784 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SEMA3FQ13275 785 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 LY6KQ17RY6 165 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 DUSP28Q4G0W2 176 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 MAP3K21Q5TCX8 1036 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 IQSEC1Q6DN90 963 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 CYFIP1Q7L576 1253 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 TRPV1Q8NER1 839 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 ETNPPLQ8TBG4 499 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 KCNG4Q8TDN1 519 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SLC5A5Q92911 643 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 TNPO1Q92973 898 aaKnown RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SPATA32Q96LK8 384 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 FAM20AQ96MK3 541 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 RIT2Q99578 217 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SENP7Q9BQF6 1050 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 RAB34Q9BZG1 259 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 SCAND2PQ9GZW5 306 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 AP5M1Q9H0R1 490 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 TMEM60Q9H2L4 133 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms