RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PRR33A8MZF0 331 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 ZNF213O14771 459 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 PPFIA4O75335 1185 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 F2P00734 622 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 KCNA5P22460 613 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 GPNMBQ14956 572 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 TTC22Q5TAA0 569 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 FAM178BQ8IXR5 827 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 PNMA1Q8ND90 353 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 FAM227BQ96M60 508 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
CDC42BPB-203ENST00000558867 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 NR3C2P08235 984 aa18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 EIF2AK2P19525 551 aaKnown RBP18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 ZNF618Q5T7W0 954 aa18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 SPRED2Q7Z698 418 aa18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 ADGRF4Q8IZF3 695 aa18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 MAP3K20Q9NYL2 800 aaKnown RBP18.61■□□□□ 0.57
CDC42BPB-203ENST00000558867 BRWD1Q9NSI6 2320 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 FAM86C2PA6NEL3 165 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 RSPH10B2B2RC85 870 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 CFBP00751 764 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 PARP1P09874 1014 aaKnown RBP18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 RSPH10BP0C881 870 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 PDE1AP54750 535 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 TRAF1Q13077 416 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 TIGD5Q53EQ6 642 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 PTCRAQ6ISU1 281 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 MYOCDQ8IZQ8 938 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 SAMD3Q8N6K7 520 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 TBC1D5Q92609 795 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 MRPL38Q96DV4 380 aaKnown RBP18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 ZKSCAN3Q9BRR0 538 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 KIAA1217Q5T5P2 1943 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 PIEZO1Q92508 2521 aa18.6■□□□□ 0.57
CDC42BPB-203ENST00000558867 PTPRSQ13332 1948 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 HAS3O00219 553 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 ZNF286BP0CG31 522 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 THPOP40225 353 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 NMIQ13287 307 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 QRICH1Q2TAL8 776 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 SEPT8Q92599 483 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 KHSRPQ92945 711 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 SPATA33Q96N06 139 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 CPVLQ9H3G5 476 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 C11orf16Q9NQ32 467 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 PXMP2Q9NR77 195 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 COL20A1Q9P218 1284 aa18.59■□□□□ 0.57
CDC42BPB-203ENST00000558867 SIP14410 1827 aa18.58■□□□□ 0.57
CDC42BPB-203ENST00000558867 TGFB3P10600 412 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 GSPT1P15170 499 aaKnown RBP18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 DBF4BQ8NFT6 615 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 RILPL2Q969X0 211 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 UIMC1Q96RL1 719 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 YME1L1Q96TA2 773 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 C17orf80Q9BSJ5 609 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 AMNQ9BXJ7 453 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 VAT1LQ9HCJ6 419 aa18.58■□□□□ 0.56
CDC42BPB-203ENST00000558867 MUC6Q6W4X9 2439 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 C17orf102A2RUQ5 167 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 GRXCR2A6NFK2 248 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 NCK2O43639 380 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 CAND2O75155 1236 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 KDM4AO75164 1064 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 GNAT1P11488 350 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 MYCLP12524 364 aaPredicted RBP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 HTRA4P83105 476 aaPredicted RBP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 TRIM71Q2Q1W2 868 aaKnown RBP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 MYSM1Q5VVJ2 828 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 TBC1D10CQ8IV04 446 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 ANKS1AQ92625 1134 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 ATP6V0A1Q93050 837 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 ZSCAN10Q96SZ4 725 aaPredicted RBP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 MLXIPQ9HAP2 919 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 UPF2Q9HAU5 1272 aaKnown RBP18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 CD320Q9NPF0 282 aa18.57■□□□□ 0.56
CDC42BPB-203ENST00000558867 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 GPM6BQ13491 265 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 EPC2Q52LR7 807 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 CELF3Q5SZQ8 465 aaKnown RBP18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 EP400NLQ6ZTU2 488 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 SERINC5Q86VE9 423 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 BANK1Q8NDB2 785 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 SP7Q8TDD2 431 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 JMJD4Q9H9V9 463 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 PRKAG3Q9UGI9 489 aa18.56■□□□□ 0.56
CDC42BPB-203ENST00000558867 NEDD4P46934 1319 aa18.55■□□□□ 0.56
CDC42BPB-203ENST00000558867 CDC45O75419 566 aa18.55■□□□□ 0.56
CDC42BPB-203ENST00000558867 GGPS1O95749 300 aa18.55■□□□□ 0.56
CDC42BPB-203ENST00000558867 IL9P15248 144 aa18.55■□□□□ 0.56
CDC42BPB-203ENST00000558867 HSD17B4P51659 736 aa18.55■□□□□ 0.56
CDC42BPB-203ENST00000558867 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
CDC42BPB-203ENST00000558867 TCTN1Q2MV58 587 aa18.55■□□□□ 0.56
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