RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 GRM4Q14833 912 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 FAM47CQ5HY64 1035 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 RASIP1Q5U651 963 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 ARHGEF16Q5VV41 709 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 CYB5R4Q7L1T6 521 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 MAFAQ8NHW3 353 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-205ENST00000558700 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 MYLIPQ8WY64 445 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 IWS1Q96ST2 819 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 RMDN3Q96TC7 470 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 TRPV6Q9H1D0 765 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 SEMA6BQ9H3T3 888 aa9.36□□□□□ -0.91
TRAF3-205ENST00000558700 UMODL1Q5DID0 1318 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 LAMA2P24043 3122 aaKnown RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 IFIT3O14879 490 aaKnown RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 ARIH2O95376 493 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 CFBP00751 764 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 GH1P01241 217 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 PFKMP08237 780 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 MMP3P08254 477 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 ACRP10323 421 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 EIF2AK2P19525 551 aaKnown RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 HSD17B4P51659 736 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 GHRHRQ02643 423 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 PTH1RQ03431 593 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 PTPN11Q06124 597 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 WTAPQ15007 396 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 RAB30Q15771 203 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 STXBP2Q15833 593 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 NFRKBQ6P4R8 1299 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 ZNF365Q70YC5 407 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 RPUSD2Q8IZ73 545 aaKnown RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 SAMD3Q8N6K7 520 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 COPS5Q92905 334 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 TIFAQ96CG3 184 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 VAT1LQ9HCJ6 419 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 TRMT13Q9NUP7 481 aaKnown RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 MAP3K20Q9NYL2 800 aaKnown RBP9.35□□□□□ -0.91
TRAF3-205ENST00000558700 COL20A1Q9P218 1284 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 MAD2L2Q9UI95 211 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 NOD1Q9Y239 953 aa9.35□□□□□ -0.91
TRAF3-205ENST00000558700 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-205ENST00000558700 E7EWF7 191 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 DLL1O00548 723 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 FGBP02675 491 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 RFC2P35250 354 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 CCL23P55773 120 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 ARHGAP1Q07960 439 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 TMEM67Q5HYA8 995 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 CCDC62Q6P9F0 684 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 SEPT14Q6ZU15 432 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 C16orf59Q7L2K0 433 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 CATIPQ7Z7H3 387 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 HOMER1Q86YM7 354 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 CCDC155Q8N6L0 562 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 MTMR8Q96EF0 704 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 TAAR1Q96RJ0 339 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 KATNAL1Q9BW62 490 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 PBX4Q9BYU1 374 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 PXMP2Q9NR77 195 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 MSRAQ9UJ68 235 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 PCDHA1Q9Y5I3 950 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
TRAF3-205ENST00000558700 MYH7BA7E2Y1 1941 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 ZBBXA8MT70 800 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 OPLAHO14841 1288 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 PPP1R11O60927 126 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-205ENST00000558700 EIF3JO75822 258 aaKnown RBP9.33□□□□□ -0.92
TRAF3-205ENST00000558700 DDAH1O94760 285 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 NR3C2P08235 984 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 CYP2C9P11712 490 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 ACTN1P12814 892 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 BFSP2Q13515 415 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 DGKDQ16760 1214 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 KCNV1Q6PIU1 500 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 CASC1Q6TDU7 716 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 OTOP2Q7RTS6 562 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 MB21D2Q8IYB1 491 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-205ENST00000558700 RETREG2Q8NC44 543 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 CAGE1Q8TC20 777 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 AFG1LQ8WV93 481 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 TBC1D5Q92609 795 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-205ENST00000558700 SCLYQ96I15 445 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-205ENST00000558700 PDCD2LQ9BRP1 358 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 MTA3Q9BTC8 594 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 ZNF576Q9H609 170 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 RIOX1Q9H6W3 641 aa9.33□□□□□ -0.92
TRAF3-205ENST00000558700 RBM8AQ9Y5S9 174 aaKnown RBP9.33□□□□□ -0.92
TRAF3-205ENST00000558700 PNMA6FA0A0J9YX94 578 aa9.32□□□□□ -0.92
TRAF3-205ENST00000558700 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
TRAF3-205ENST00000558700 GCOM1H8Y6P7 765 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-205ENST00000558700 F2P00734 622 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms