RNA–Protein interactions for RNA: ENST00000558604.1

ACAN-204, Transcript of aggrecan, humanhuman

TSL 2

Gene ACAN, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-204ENST00000558604 SGMS1Q86VZ5 419 aa17.09■□□□□ 0.33
ACAN-204ENST00000558604 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
ACAN-204ENST00000558604 TIFAQ96CG3 184 aa17.09■□□□□ 0.33
ACAN-204ENST00000558604 CDX2Q99626 313 aaPredicted RBP17.09■□□□□ 0.33
ACAN-204ENST00000558604 TTYH1Q9H313 450 aaPredicted RBP17.09■□□□□ 0.33
ACAN-204ENST00000558604 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
ACAN-204ENST00000558604 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
ACAN-204ENST00000558604 SCN5AQ14524 2016 aa17.08■□□□□ 0.33
ACAN-204ENST00000558604 hCG_1642624A0A1W2PR95 340 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 PITPNM1O00562 1244 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 TGFB3P10600 412 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 ACTN1P12814 892 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 APOA5Q6Q788 366 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.32
ACAN-204ENST00000558604 KAT2BQ92831 832 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 RTEL1Q9NZ71 1219 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
ACAN-204ENST00000558604 GBF1Q92538 1859 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 GRXCR1A8MXD5 290 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 ZBTB43O43298 467 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 FIBPO43427 364 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 F2P00734 622 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 HMGB1P09429 215 aaKnown RBP17.07■□□□□ 0.32
ACAN-204ENST00000558604 FOSL2P15408 326 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 RFC2P35250 354 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 RAB30Q15771 203 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 RTN1Q16799 776 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 MYSM1Q5VVJ2 828 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
ACAN-204ENST00000558604 SESTD1Q86VW0 696 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 MYLIPQ8WY64 445 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
ACAN-204ENST00000558604 PBX4Q9BYU1 374 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 FTOQ9C0B1 505 aaKnown RBP eCLIP17.07■□□□□ 0.32
ACAN-204ENST00000558604 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
ACAN-204ENST00000558604 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
ACAN-204ENST00000558604 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 KLF18A0A0U1RQI7 1052 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 SPDYE3A6NKU9 549 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 NEDD9Q14511 834 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 HSDL1Q3SXM5 330 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 PCNX4Q63HM2 1172 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 XRRA1Q6P2D8 792 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 NLRX1Q86UT6 975 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 INPP4AQ96PE3 977 aaPredicted RBP17.06■□□□□ 0.32
ACAN-204ENST00000558604 HDAC6Q9UBN7 1215 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 GTF2IRD1Q9UHL9 959 aa17.06■□□□□ 0.32
ACAN-204ENST00000558604 CNTNAP5Q8WYK1 1306 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 MEIS2O14770 477 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 IQCF3P0C7M6 154 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 PBX2P40425 430 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 NAPAP54920 295 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
ACAN-204ENST00000558604 SP2Q02086 613 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 SP4Q02446 784 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 UBE2SQ16763 222 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 METTL7BQ6UX53 244 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
ACAN-204ENST00000558604 ZNF576Q9H609 170 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 EHMT1Q9H9B1 1298 aa17.05■□□□□ 0.32
ACAN-204ENST00000558604 REC8O95072 547 aa17.04■□□□□ 0.32
ACAN-204ENST00000558604 HOXD8P13378 290 aaPredicted RBP17.04■□□□□ 0.32
ACAN-204ENST00000558604 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
ACAN-204ENST00000558604 TSGA10IPQ3SY00 556 aa17.04■□□□□ 0.32
ACAN-204ENST00000558604 LRRC8DQ7L1W4 858 aa17.04■□□□□ 0.32
ACAN-204ENST00000558604 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
ACAN-204ENST00000558604 MAFAQ8NHW3 353 aaPredicted RBP17.04■□□□□ 0.32
ACAN-204ENST00000558604 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
ACAN-204ENST00000558604 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
ACAN-204ENST00000558604 SPATA31C2B4DYI2 1134 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 LGALS2P05162 132 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 SELPP16109 830 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
ACAN-204ENST00000558604 ICAM3P32942 547 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 WWC2Q6AWC2 1192 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 CDHR1Q96JP9 859 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 NKX2-4Q9H2Z4 354 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 SLC28A3Q9HAS3 691 aa17.03■□□□□ 0.32
ACAN-204ENST00000558604 ZNF215Q9UL58 517 aaPredicted RBP17.03■□□□□ 0.32
ACAN-204ENST00000558604 LAMA2P24043 3122 aaKnown RBP17.03■□□□□ 0.32
ACAN-204ENST00000558604 H3BRB1 525 aa17.02■□□□□ 0.32
ACAN-204ENST00000558604 HAS3O00219 553 aa17.02■□□□□ 0.32
ACAN-204ENST00000558604 HSPA4P34932 840 aa17.02■□□□□ 0.32
ACAN-204ENST00000558604 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
ACAN-204ENST00000558604 ADCY7P51828 1080 aa17.02■□□□□ 0.32
ACAN-204ENST00000558604 PTK7Q13308 1070 aa17.02■□□□□ 0.32
ACAN-204ENST00000558604 GRIN2CQ14957 1233 aa17.02■□□□□ 0.32
ACAN-204ENST00000558604 PPP1R18Q6NYC8 613 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms