RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
VPS18-202ENST00000558474 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
VPS18-202ENST00000558474 ASTN1O14525 1302 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 PGK2P07205 417 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 TXLNAP40222 546 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 TXKP42681 527 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 FCGRTP55899 365 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 PDE4DQ08499 809 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 MAP2K5Q13163 448 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 IL17AQ16552 155 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 SHC4Q6S5L8 630 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 CCDC73Q6ZRK6 1079 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 DPP9Q86TI2 863 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 FGD4Q96M96 766 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 WDR11Q9BZH6 1224 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 CSRNP2Q9H175 543 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 TTC12Q9H892 705 aaPredicted RBP16.8■□□□□ 0.28
VPS18-202ENST00000558474 KCNH7Q9NS40 1196 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 HPSEQ9Y251 543 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
VPS18-202ENST00000558474 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
VPS18-202ENST00000558474 TRAK2O60296 914 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 TGFB3P10600 412 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 LACTBP83111 547 aaPredicted RBP16.79■□□□□ 0.28
VPS18-202ENST00000558474 SP3Q02447 781 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 KIF22Q14807 665 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 FSIP1Q8NA03 581 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 CYP2W1Q8TAV3 490 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 GPT2Q8TD30 523 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 USP6NLQ92738 828 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 ZNF577Q9BSK1 485 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
VPS18-202ENST00000558474 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
VPS18-202ENST00000558474 NFASCO94856 1347 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 SYNGAP1Q96PV0 1343 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 SPATA31C2B4DYI2 1134 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 TNPO2O14787 897 aaKnown RBP16.78■□□□□ 0.28
VPS18-202ENST00000558474 COBLO75128 1261 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 PSMD10O75832 226 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 GNRH1P01148 92 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 ARP10275 920 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 RGS2P41220 211 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 TECP42680 631 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
VPS18-202ENST00000558474 PPP2R5CQ13362 524 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 KCTD17Q8N5Z5 321 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 GIMAP8Q8ND71 665 aaPredicted RBP16.78■□□□□ 0.28
VPS18-202ENST00000558474 SENP7Q9BQF6 1050 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
VPS18-202ENST00000558474 TRPA1O75762 1119 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 UBA7P41226 1012 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 GRIN1Q05586 938 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 ARHGEF6Q15052 776 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 LRCH2Q5VUJ6 765 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 ENGASEQ8NFI3 743 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 ERMNQ8TAM6 284 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 SYAP1Q96A49 352 aaPredicted RBP16.77■□□□□ 0.28
VPS18-202ENST00000558474 MAML3Q96JK9 1138 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 TIGD1Q96MW7 591 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 TEKT3Q9BXF9 490 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 VTA1Q9NP79 307 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 DDX19AQ9NUU7 478 aaKnown RBP16.77■□□□□ 0.28
VPS18-202ENST00000558474 CCDC39Q9UFE4 941 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 GJD2Q9UKL4 321 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.28
VPS18-202ENST00000558474 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
VPS18-202ENST00000558474 GAS7O60861 476 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 RGS20O76081 388 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 XRCC5P13010 732 aaKnown RBP16.76■□□□□ 0.27
VPS18-202ENST00000558474 PFKFB1P16118 471 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 MUTP22033 750 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 HTRA3P83110 453 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 SPIRE1Q08AE8 756 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 HAUS3Q68CZ6 603 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 OTOP1Q7RTM1 612 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 ELOA2Q8IYF1 753 aaPredicted RBP16.76■□□□□ 0.27
VPS18-202ENST00000558474 TRMT44Q8IYL2 757 aaKnown RBP16.76■□□□□ 0.27
VPS18-202ENST00000558474 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
VPS18-202ENST00000558474 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
VPS18-202ENST00000558474 CCDC34Q96HJ3 373 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 APBA2Q99767 749 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 TCEAL9Q9UHQ7 104 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 VAV3Q9UKW4 847 aa16.76■□□□□ 0.27
VPS18-202ENST00000558474 KDM3AQ9Y4C1 1321 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 A0A1B0GVL5 298 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 DHX15O43143 795 aaKnown RBP16.75■□□□□ 0.27
VPS18-202ENST00000558474 SYKP43405 635 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 PSMC4P43686 418 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 NDUFA8P51970 172 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 KRT76Q01546 638 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 SNW1Q13573 536 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms