RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 GLT1D1Q96MS3 346 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 ALG1Q9BT22 464 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 STARD7Q9NQZ5 370 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 SORBS3O60504 671 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 GGPS1O95749 300 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 ITGB5P18084 799 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 UBA1P22314 1058 aaKnown RBP14.11□□□□□ -0.15
SMAD3-205ENST00000558428 SREBF1P36956 1147 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 ARHGAP4P98171 946 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 ARHGAP1Q07960 439 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 CXCL17Q6UXB2 119 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 DHX37Q8IY37 1157 aaKnown RBP14.11□□□□□ -0.15
SMAD3-205ENST00000558428 BLIDQ8IZY5 108 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 GPRASP2Q96D09 838 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 KCNJ14Q9UNX9 436 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 UBIAD1Q9Y5Z9 338 aa14.11□□□□□ -0.15
SMAD3-205ENST00000558428 SPATA31C2B4DYI2 1134 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 CABYRO75952 493 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
SMAD3-205ENST00000558428 MYL3P08590 195 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 ZNF76P36508 570 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 MCM2P49736 904 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 RTP1P59025 263 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 SP2Q02086 613 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 CELF3Q5SZQ8 465 aaKnown RBP14.1□□□□□ -0.15
SMAD3-205ENST00000558428 C7orf61Q8IZ16 206 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 DAGLBQ8NCG7 672 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 AFG1LQ8WV93 481 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 CDHR1Q96JP9 859 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 MXRA8Q9BRK3 442 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 LLPHQ9BRT6 129 aaKnown RBP14.1□□□□□ -0.15
SMAD3-205ENST00000558428 PHF20Q9BVI0 1012 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 MLXIPQ9HAP2 919 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 JADE2Q9NQC1 790 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 GJB4Q9NTQ9 266 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 POLR3EQ9NVU0 708 aa14.1□□□□□ -0.15
SMAD3-205ENST00000558428 A6NJR5 290 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 MMP3P08254 477 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 FOSBP53539 338 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 MTMR1Q13613 665 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 NEDD9Q14511 834 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 NPY5RQ15761 445 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 CEP55Q53EZ4 464 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 EMID1Q96A84 441 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-205ENST00000558428 SPATA33Q96N06 139 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 NR2E3Q9Y5X4 410 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 ELP1O95163 1332 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 SCN10AQ9Y5Y9 1956 aa14.09□□□□□ -0.15
SMAD3-205ENST00000558428 A0A0U1RQG5 324 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-205ENST00000558428 MAFGO15525 162 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 KPNA6O60684 536 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 CYP3A4P08684 503 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 HMGN5P82970 282 aaKnown RBP14.08□□□□□ -0.16
SMAD3-205ENST00000558428 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
SMAD3-205ENST00000558428 TRIM29Q14134 588 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 SNX17Q15036 470 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 TRIM60Q495X7 471 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 C1orf53Q5VUE5 145 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 PPTC7Q8NI37 304 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 CYP2W1Q8TAV3 490 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 CRYGNQ8WXF5 182 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 TMX3Q96JJ7 454 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 SENP7Q9BQF6 1050 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-205ENST00000558428 BCAS3Q9H6U6 928 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 PKD2L1Q9P0L9 805 aa14.08□□□□□ -0.16
SMAD3-205ENST00000558428 M0R2N6 131 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
SMAD3-205ENST00000558428 ATP9AO75110 1047 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 KCNA2P16389 499 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 PSMC6P62333 389 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 ITGA7Q13683 1181 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 DGKDQ16760 1214 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 HSDL1Q3SXM5 330 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 METTL7BQ6UX53 244 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 FAM184AQ8NB25 1140 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 GIMAP8Q8ND71 665 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-205ENST00000558428 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 BRMS1Q9HCU9 246 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 KCNH7Q9NS40 1196 aa14.07□□□□□ -0.16
SMAD3-205ENST00000558428 CCDC194A0A1B0GVG4 234 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 FAM86B1E9PN63 330 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 ARVCFO00192 962 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 MEIS1O00470 390 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 PQBP1O60828 265 aaKnown RBP14.06□□□□□ -0.16
SMAD3-205ENST00000558428 FAM86B2P0C5J1 330 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 ARP10275 920 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 KRT2P35908 639 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 SP4Q02446 784 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 TLE2Q04725 743 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 NONOQ15233 471 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms