RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MYADML2A6NDP7 307 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
TPM1-213ENST00000558400 CDKL5O76039 1030 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 COL9A1P20849 921 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 ICAM3P32942 547 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 ADCY7P51828 1080 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 CCT2P78371 535 aaKnown RBP9.72□□□□□ -0.85
TPM1-213ENST00000558400 NEDD9Q14511 834 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 NTRK3Q16288 839 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 DGKDQ16760 1214 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 WWC2Q6AWC2 1192 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 CXCL17Q6UXB2 119 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 DHX37Q8IY37 1157 aaKnown RBP9.72□□□□□ -0.85
TPM1-213ENST00000558400 SLC43A3Q8NBI5 491 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 CCDC148Q8NFR7 591 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 BICD2Q8TD16 824 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 INPP4AQ96PE3 977 aaPredicted RBP9.72□□□□□ -0.85
TPM1-213ENST00000558400 SENP7Q9BQF6 1050 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 MTG1Q9BT17 334 aaPredicted RBP9.72□□□□□ -0.85
TPM1-213ENST00000558400 ZMYND12Q9H0C1 365 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 SLKQ9H2G2 1235 aaPredicted RBP9.72□□□□□ -0.85
TPM1-213ENST00000558400 SH3GLB2Q9NR46 395 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 PCDHA6Q9UN73 950 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 PCDHA8Q9Y5H6 950 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 FRMPD4Q14CM0 1322 aa9.72□□□□□ -0.85
TPM1-213ENST00000558400 SPTBN5Q9NRC6 3674 aaKnown RBP9.71□□□□□ -0.85
TPM1-213ENST00000558400 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 STXBP3O00186 592 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 FIBPO43427 364 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 RGS20O76081 388 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 MYL3P08590 195 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 CLTBP09497 229 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 SUPT20HL2P0C7V6 817 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 NEK4P51957 841 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 MRPS9P82933 396 aaKnown RBP9.71□□□□□ -0.86
TPM1-213ENST00000558400 PURAQ00577 322 aaKnown RBP9.71□□□□□ -0.86
TPM1-213ENST00000558400 PTPN11Q06124 597 aaPredicted RBP9.71□□□□□ -0.86
TPM1-213ENST00000558400 AP3B2Q13367 1082 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 ITGA7Q13683 1181 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 TRIM60Q495X7 471 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 CELF3Q5SZQ8 465 aaKnown RBP9.71□□□□□ -0.86
TPM1-213ENST00000558400 TMEM63BQ5T3F8 832 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 PPTC7Q8NI37 304 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 GPKOWQ92917 476 aaPredicted RBP eCLIP9.71□□□□□ -0.86
TPM1-213ENST00000558400 GPRASP2Q96D09 838 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 MLXIPQ9HAP2 919 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 UPF2Q9HAU5 1272 aaKnown RBP9.71□□□□□ -0.86
TPM1-213ENST00000558400 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 RTEL1Q9NZ71 1219 aa9.71□□□□□ -0.86
TPM1-213ENST00000558400 ZMYND8Q9ULU4 1186 aaPredicted RBP9.71□□□□□ -0.86
TPM1-213ENST00000558400 MYH6P13533 1939 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 KIAA0355O15063 1070 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 PFKFB2O60825 505 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 PQBP1O60828 265 aaKnown RBP9.7□□□□□ -0.86
TPM1-213ENST00000558400 ARIH2O95376 493 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 DEXIO95424 95 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 SEC24BO95487 1268 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 RAG1P15918 1043 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 SYN1P17600 705 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 XBP1P17861 261 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 IRX5P78411 483 aaPredicted RBP9.7□□□□□ -0.86
TPM1-213ENST00000558400 ARHGAP1Q07960 439 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 FAAP100Q0VG06 881 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 PKN1Q16512 942 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 GALNT17Q6IS24 598 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 NFRKBQ6P4R8 1299 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 TDHQ8IZJ6 230 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 AFG1LQ8WV93 481 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 COPS5Q92905 334 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 PHKBQ93100 1093 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 SPATA33Q96N06 139 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 KATNAL1Q9BW62 490 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 C22orf23Q9BZE7 217 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 MCM3APO60318 1980 aa9.7□□□□□ -0.86
TPM1-213ENST00000558400 GGPS1O95749 300 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 MMP3P08254 477 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 ZNF76P36508 570 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 MAGEA10P43363 369 aaPredicted RBP9.69□□□□□ -0.86
TPM1-213ENST00000558400 NLRP5P59047 1200 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 STK3Q13188 491 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 UBE2SQ16763 222 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 METTL7BQ6UX53 244 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 IL31RAQ8NI17 732 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 WASF1Q92558 559 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 GUCD1Q96NT3 240 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 UBE2OQ9C0C9 1292 aaKnown RBP9.69□□□□□ -0.86
TPM1-213ENST00000558400 NCOA5Q9HCD5 579 aaKnown RBP9.69□□□□□ -0.86
TPM1-213ENST00000558400 JADE2Q9NQC1 790 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 PRDM5Q9NQX1 630 aaPredicted RBP9.69□□□□□ -0.86
TPM1-213ENST00000558400 PDLIM7Q9NR12 457 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 UBIAD1Q9Y5Z9 338 aa9.69□□□□□ -0.86
TPM1-213ENST00000558400 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
TPM1-213ENST00000558400 TIMP1P01033 207 aa9.68□□□□□ -0.86
TPM1-213ENST00000558400 CD4P01730 458 aa9.68□□□□□ -0.86
TPM1-213ENST00000558400 CYP3A4P08684 503 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms