RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PKP1Q13835 747 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 LY6KQ17RY6 165 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 NIPA1Q7RTP0 329 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 LENG1Q96BZ8 264 aaPredicted RBP24.15■■□□□ 1.46
CASC4-204ENST00000557945 PKD2L1Q9P0L9 805 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 DDX20Q9UHI6 824 aaKnown RBP24.15■■□□□ 1.46
CASC4-204ENST00000557945 DDX25Q9UHL0 483 aaKnown RBP24.15■■□□□ 1.46
CASC4-204ENST00000557945 IGLV3-22A0A075B6J6 115 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 CYP3A7-CYP3A51PA0A087WV96 503 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 ZSCAN22P10073 491 aaPredicted RBP24.14■■□□□ 1.45
CASC4-204ENST00000557945 RARBP10826 455 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 CYP3A7P24462 503 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 SETQ01105 290 aaPredicted RBP24.14■■□□□ 1.45
CASC4-204ENST00000557945 TMEM63BQ5T3F8 832 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 GJC2Q5T442 439 aaPredicted RBP24.14■■□□□ 1.45
CASC4-204ENST00000557945 CCDC62Q6P9F0 684 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 MOXD1Q6UVY6 613 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 UIMC1Q96RL1 719 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 KCNH7Q9NS40 1196 aa24.14■■□□□ 1.45
CASC4-204ENST00000557945 DDX41Q9UJV9 622 aaKnown RBP24.14■■□□□ 1.45
CASC4-204ENST00000557945 MAFGO15525 162 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 ADCY6O43306 1168 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 MSCO60682 206 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 TGFB3P10600 412 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 TRAPPC10P48553 1259 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 DUSP28Q4G0W2 176 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 TTC38Q5R3I4 469 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 PPP4R3AQ6IN85 833 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 COPS5Q92905 334 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 DEFB118Q96PH6 123 aa24.13■■□□□ 1.45
CASC4-204ENST00000557945 ZSCAN16Q9H4T2 348 aaPredicted RBP24.13■■□□□ 1.45
CASC4-204ENST00000557945 KIAA1217Q5T5P2 1943 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 WNT7AO00755 349 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 SLC37A4O43826 429 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 SORBS3O60504 671 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 PTGS1P23219 599 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 ZNF174Q15697 407 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 Q4G0T1 1027 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 RILPL1Q5EBL4 403 aa24.12■■□□□ 1.45
CASC4-204ENST00000557945 IPO9Q96P70 1041 aaKnown RBP24.12■■□□□ 1.45
CASC4-204ENST00000557945 AGO4Q9HCK5 861 aaKnown RBP24.12■■□□□ 1.45
CASC4-204ENST00000557945 PAK6Q9NQU5 681 aaPredicted RBP24.12■■□□□ 1.45
CASC4-204ENST00000557945 NKRFO15226 690 aaKnown RBP eCLIP24.11■■□□□ 1.45
CASC4-204ENST00000557945 DUSP11O75319 330 aaKnown RBP24.11■■□□□ 1.45
CASC4-204ENST00000557945 UBA1P22314 1058 aaKnown RBP24.11■■□□□ 1.45
CASC4-204ENST00000557945 MCM7P33993 719 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 TOB1P50616 345 aaPredicted RBP24.11■■□□□ 1.45
CASC4-204ENST00000557945 SP2Q02086 613 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 NBR1Q14596 966 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 LENG9Q96B70 501 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 MBOAT7Q96N66 472 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 ZNF577Q9BSK1 485 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 AP5M1Q9H0R1 490 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 XPNPEP3Q9NQH7 507 aa24.11■■□□□ 1.45
CASC4-204ENST00000557945 GNEQ9Y223 722 aaKnown RBP24.11■■□□□ 1.45
CASC4-204ENST00000557945 DYNC1LI2O43237 492 aaPredicted RBP24.1■■□□□ 1.45
CASC4-204ENST00000557945 MARCH6O60337 910 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 ATP9AO75110 1047 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 GGPS1O95749 300 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 F13A1P00488 732 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 GH1P01241 217 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 MYCNP04198 464 aaPredicted RBP24.1■■□□□ 1.45
CASC4-204ENST00000557945 NEDD9Q14511 834 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 MYSM1Q5VVJ2 828 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 LHX8Q68G74 356 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 TLK2Q86UE8 772 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 DHX37Q8IY37 1157 aaKnown RBP24.1■■□□□ 1.45
CASC4-204ENST00000557945 OR6J1Q8NGC5 347 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 TMEM106CQ9BVX2 250 aa24.1■■□□□ 1.45
CASC4-204ENST00000557945 IPO5O00410 1097 aaKnown RBP24.09■■□□□ 1.45
CASC4-204ENST00000557945 MSH4O15457 936 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 NEMFO60524 1076 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 BRD1O95696 1058 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 KCNA2P16389 499 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 FAM173BQ6P4H8 233 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 POTEDQ86YR6 584 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 TNS4Q8IZW8 715 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 SENP7Q9BQF6 1050 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 MLXIPQ9HAP2 919 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 SPC25Q9HBM1 224 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 PCDHB6Q9Y5E3 794 aa24.09■■□□□ 1.45
CASC4-204ENST00000557945 CENPFP49454 3210 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 PGK1P00558 417 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 GJB1P08034 283 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 CELF3Q5SZQ8 465 aaKnown RBP24.08■■□□□ 1.45
CASC4-204ENST00000557945 CYFIP1Q7L576 1253 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 GIMAP8Q8ND71 665 aaPredicted RBP24.08■■□□□ 1.45
CASC4-204ENST00000557945 SDF4Q9BRK5 362 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 BCAS3Q9H6U6 928 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 Q9Y3F1 56 aa24.08■■□□□ 1.45
CASC4-204ENST00000557945 SYNRGQ9UMZ2 1314 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 DDIT3P35638 169 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 SP4Q02446 784 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 ARHGAP1Q07960 439 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 ITGB3BPQ13352 177 aaPredicted RBP24.07■■□□□ 1.44
CASC4-204ENST00000557945 CALCRLQ16602 461 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 ABHD8Q96I13 439 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 ZDHHC9Q9Y397 364 aa24.07■■□□□ 1.44
CASC4-204ENST00000557945 DDX39AO00148 427 aaKnown RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 BAG4O95429 457 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms