RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RNF208Q9H0X6 261 aa16.02■□□□□ 0.16
SUPT16H-208ENST00000557652 TBC1D22BQ9NU19 505 aa16.02■□□□□ 0.16
SUPT16H-208ENST00000557652 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
SUPT16H-208ENST00000557652 MTMR6Q9Y217 621 aa16.02■□□□□ 0.16
SUPT16H-208ENST00000557652 GNEQ9Y223 722 aaKnown RBP16.02■□□□□ 0.16
SUPT16H-208ENST00000557652 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
SUPT16H-208ENST00000557652 DOCK5Q9H7D0 1870 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 KAT6AQ92794 2004 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 IGLV3-22A0A075B6J6 115 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 LAD1O00515 517 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 ADAMTS3O15072 1205 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 DTNBO60941 627 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 GH1P01241 217 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 CST5P28325 142 aaPredicted RBP16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 NUCB2P80303 420 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 TRIM32Q13049 653 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 LAMC2Q13753 1193 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 LETM2Q2VYF4 491 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 EEPD1Q7L9B9 569 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 ANKLE1Q8NAG6 615 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 ARRDC4Q8NCT1 418 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 FAM20AQ96MK3 541 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 KCNH7Q9NS40 1196 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
SUPT16H-208ENST00000557652 FAM86B1E9PN63 330 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 KPNA6O60684 536 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 FAM86B2P0C5J1 330 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 ADCYAP1R1P41586 468 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 GJA9P57773 515 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 PRAMEF19Q5SWL8 479 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 COL13A1Q5TAT6 717 aaPredicted RBP16■□□□□ 0.15
SUPT16H-208ENST00000557652 ATL3Q6DD88 541 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 METTL7BQ6UX53 244 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 SLFN12Q8IYM2 578 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 RIT2Q99578 217 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 SDF4Q9BRK5 362 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 CRISPLD2Q9H0B8 497 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 AP5M1Q9H0R1 490 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 RTEL1Q9NZ71 1219 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 DDX25Q9UHL0 483 aaKnown RBP16■□□□□ 0.15
SUPT16H-208ENST00000557652 TCEAL9Q9UHQ7 104 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 ATP6V1DQ9Y5K8 247 aa16■□□□□ 0.15
SUPT16H-208ENST00000557652 KIF28PB7ZC32 967 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 ZEB2O60315 1214 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 CCNT1O60563 726 aaKnown RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 BAG4O95429 457 aaKnown RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 SGPL1O95470 568 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 ZSCAN22P10073 491 aaPredicted RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 SMPD1P17405 629 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 GJA8P48165 433 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 CPT1AP50416 773 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 MTFR1Q15390 333 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 PRR16Q569H4 304 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 CELF3Q5SZQ8 465 aaKnown RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 RNF180Q86T96 592 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 TLK2Q86UE8 772 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 PCSK9Q8NBP7 692 aaKnown RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 LENG9Q96B70 501 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 TSEN34Q9BSV6 310 aaKnown RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 PDGFCQ9NRA1 345 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 MORC2Q9Y6X9 1032 aaPredicted RBP15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 TCHHQ07283 1943 aa15.99■□□□□ 0.15
SUPT16H-208ENST00000557652 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 EDIL3O43854 480 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 NEMFO60524 1076 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 KCNA2P16389 499 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 UBA1P22314 1058 aaKnown RBP15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 SEMA3FQ13275 785 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 EARS2Q5JPH6 523 aaKnown RBP15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 TTC38Q5R3I4 469 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 LHX8Q68G74 356 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 TNS4Q8IZW8 715 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 RDM1Q8NG50 284 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 PPTC7Q8NI37 304 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 U2AF1L4Q8WU68 220 aaKnown RBP15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 ZNF577Q9BSK1 485 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 SEZ6LQ9BYH1 1024 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 KCNMB3Q9NPA1 279 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 XPNPEP3Q9NQH7 507 aa15.98■□□□□ 0.15
SUPT16H-208ENST00000557652 SCN10AQ9Y5Y9 1956 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 A6NJR5 290 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 BRD1O95696 1058 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 KRT76Q01546 638 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 RESTQ13127 1097 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 SMAP1Q8IYB5 467 aaPredicted RBP15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 OR6J1Q8NGC5 347 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
SUPT16H-208ENST00000557652 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms