RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 COPS5Q92905 334 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 GJA10Q969M2 543 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 NRBP1Q9UHY1 535 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 CYP3A7-CYP3A51PA0A087WV96 503 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 RBM47A0AV96 593 aaKnown RBP17.36■□□□□ 0.37
NEDD1-213ENST00000557644 SORBS3O60504 671 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 ATP9AO75110 1047 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 F13A1P00488 732 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 SMPD1P17405 629 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 CYP3A7P24462 503 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 ZNF174Q15697 407 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 CCDC62Q6P9F0 684 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 BRAPQ7Z569 592 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 NLRX1Q86UT6 975 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 ARMC5Q96C12 935 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
NEDD1-213ENST00000557644 DDX25Q9UHL0 483 aaKnown RBP17.36■□□□□ 0.37
NEDD1-213ENST00000557644 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 SPATA31C2B4DYI2 1134 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 SEPT4O43236 478 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 FIBPO43427 364 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 TXNP10599 105 aaKnown RBP17.35■□□□□ 0.37
NEDD1-213ENST00000557644 MCM7P33993 719 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 GPRASP2Q96D09 838 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 MBOAT7Q96N66 472 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
NEDD1-213ENST00000557644 AKR1A1P14550 325 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 TNFAIP2Q03169 654 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 TTLL4Q14679 1199 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 FTOQ9C0B1 505 aaKnown RBP eCLIP17.35■□□□□ 0.37
NEDD1-213ENST00000557644 ZSCAN16Q9H4T2 348 aaPredicted RBP17.35■□□□□ 0.37
NEDD1-213ENST00000557644 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
NEDD1-213ENST00000557644 FAM184BQ9ULE4 1060 aa17.35■□□□□ 0.37
NEDD1-213ENST00000557644 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
NEDD1-213ENST00000557644 CCL5P13501 91 aa17.34■□□□□ 0.37
NEDD1-213ENST00000557644 UBA1P22314 1058 aaKnown RBP17.34■□□□□ 0.37
NEDD1-213ENST00000557644 ICAM3P32942 547 aa17.34■□□□□ 0.37
NEDD1-213ENST00000557644 Q4G0T1 1027 aa17.34■□□□□ 0.37
NEDD1-213ENST00000557644 IQSEC1Q6DN90 963 aa17.34■□□□□ 0.37
NEDD1-213ENST00000557644 MOXD1Q6UVY6 613 aa17.34■□□□□ 0.37
NEDD1-213ENST00000557644 KIAA1217Q5T5P2 1943 aa17.34■□□□□ 0.37
NEDD1-213ENST00000557644 MSH4O15457 936 aa17.33■□□□□ 0.37
NEDD1-213ENST00000557644 TRAPPC10P48553 1259 aa17.33■□□□□ 0.37
NEDD1-213ENST00000557644 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.37
NEDD1-213ENST00000557644 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.37
NEDD1-213ENST00000557644 NIPA1Q7RTP0 329 aa17.33■□□□□ 0.37
NEDD1-213ENST00000557644 CHAMP1Q96JM3 812 aa17.33■□□□□ 0.37
NEDD1-213ENST00000557644 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.37
NEDD1-213ENST00000557644 RNF208Q9H0X6 261 aa17.33■□□□□ 0.37
NEDD1-213ENST00000557644 AGO4Q9HCK5 861 aaKnown RBP17.33■□□□□ 0.37
NEDD1-213ENST00000557644 MKI67P46013 3256 aaKnown RBP17.33■□□□□ 0.36
NEDD1-213ENST00000557644 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
NEDD1-213ENST00000557644 GCFC2P16383 781 aaKnown RBP17.33■□□□□ 0.36
NEDD1-213ENST00000557644 KCNA2P16389 499 aa17.33■□□□□ 0.36
NEDD1-213ENST00000557644 SETQ01105 290 aaPredicted RBP17.33■□□□□ 0.36
NEDD1-213ENST00000557644 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.36
NEDD1-213ENST00000557644 DUSP28Q4G0W2 176 aa17.33■□□□□ 0.36
NEDD1-213ENST00000557644 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
NEDD1-213ENST00000557644 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
NEDD1-213ENST00000557644 TELO2Q9Y4R8 837 aa17.33■□□□□ 0.36
NEDD1-213ENST00000557644 TGFB3P10600 412 aa17.32■□□□□ 0.36
NEDD1-213ENST00000557644 CDHR1Q96JP9 859 aa17.32■□□□□ 0.36
NEDD1-213ENST00000557644 ZNF577Q9BSK1 485 aa17.32■□□□□ 0.36
NEDD1-213ENST00000557644 PAK6Q9NQU5 681 aaPredicted RBP17.32■□□□□ 0.36
NEDD1-213ENST00000557644 DDX20Q9UHI6 824 aaKnown RBP17.32■□□□□ 0.36
NEDD1-213ENST00000557644 IPO5O00410 1097 aaKnown RBP17.32■□□□□ 0.36
NEDD1-213ENST00000557644 NEMFO60524 1076 aa17.32■□□□□ 0.36
NEDD1-213ENST00000557644 LHX8Q68G74 356 aa17.32■□□□□ 0.36
NEDD1-213ENST00000557644 ETNPPLQ8TBG4 499 aa17.32■□□□□ 0.36
NEDD1-213ENST00000557644 DNAH12Q6ZR08 3092 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 MAFGO15525 162 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 GGPS1O95749 300 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 KCNV1Q6PIU1 500 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 CYFIP1Q7L576 1253 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 HAS1Q92839 578 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 DEFB118Q96PH6 123 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 NAP1L4Q99733 375 aaKnown RBP17.31■□□□□ 0.36
NEDD1-213ENST00000557644 KCNMB3Q9NPA1 279 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
NEDD1-213ENST00000557644 DYNC1LI2O43237 492 aaPredicted RBP17.31■□□□□ 0.36
NEDD1-213ENST00000557644 PGK1P00558 417 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 RARBP10826 455 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 NUCB2P80303 420 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
NEDD1-213ENST00000557644 TLK2Q86UE8 772 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
NEDD1-213ENST00000557644 DDX39AO00148 427 aaKnown RBP17.3■□□□□ 0.36
NEDD1-213ENST00000557644 DHX15O43143 795 aaKnown RBP17.3■□□□□ 0.36
NEDD1-213ENST00000557644 SP4Q02446 784 aa17.3■□□□□ 0.36
NEDD1-213ENST00000557644 ARHGAP1Q07960 439 aa17.3■□□□□ 0.36
NEDD1-213ENST00000557644 CELF3Q5SZQ8 465 aaKnown RBP17.3■□□□□ 0.36
NEDD1-213ENST00000557644 SENP7Q9BQF6 1050 aa17.3■□□□□ 0.36
NEDD1-213ENST00000557644 TFIP11Q9UBB9 837 aaKnown RBP17.3■□□□□ 0.36
NEDD1-213ENST00000557644 DUSP11O75319 330 aaKnown RBP17.3■□□□□ 0.36
NEDD1-213ENST00000557644 PTGDRQ13258 359 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms