RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
VIPAS39-210ENST00000557466 JADE2Q9NQC1 790 aa16.93■□□□□ 0.3
VIPAS39-210ENST00000557466 ALPK3Q96L96 1907 aa16.93■□□□□ 0.3
VIPAS39-210ENST00000557466 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 FAM86B1E9PN63 330 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 DNM1LO00429 736 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 GH1P01241 217 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 FAM86B2P0C5J1 330 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 C6orf222P0C671 652 aaPredicted RBP16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 CAPN2P17655 700 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 CST5P28325 142 aaPredicted RBP16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 NKX3-2P78367 333 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 SP2Q02086 613 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 INF2Q27J81 1249 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 KCNV1Q6PIU1 500 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 PIK3AP1Q6ZUJ8 805 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 ARRDC4Q8NCT1 418 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 KLHDC9Q8NEP7 349 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 CYP2W1Q8TAV3 490 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 AP5M1Q9H0R1 490 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 Q9Y3F1 56 aa16.92■□□□□ 0.3
VIPAS39-210ENST00000557466 IGLV3-22A0A075B6J6 115 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 SORBS3O60504 671 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 TGFB3P10600 412 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 ZNF76P36508 570 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 BEX3Q00994 111 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 MTMR1Q13613 665 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 RNF180Q86T96 592 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 PKD2L1Q9P0L9 805 aa16.91■□□□□ 0.3
VIPAS39-210ENST00000557466 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 KBTBD13C9JR72 458 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 MEIS1O00470 390 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 GGPS1O95749 300 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 ARP10275 920 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 CIITAP33076 1130 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 FSCN1Q16658 493 aaKnown RBP16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 NIPA1Q7RTP0 329 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 PAWRQ96IZ0 340 aaKnown RBP16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 CDHR1Q96JP9 859 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 KCNH7Q9NS40 1196 aa16.9■□□□□ 0.3
VIPAS39-210ENST00000557466 ATP9AO75110 1047 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 TDP2O95551 362 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 COL6A1P12109 1028 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 KCNA2P16389 499 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 USP11P51784 963 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 GNASQ5JWF2 1037 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 CELF3Q5SZQ8 465 aaKnown RBP16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 NEK8Q86SG6 692 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 DHX37Q8IY37 1157 aaKnown RBP16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 EMID1Q96A84 441 aaPredicted RBP16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 LENG9Q96B70 501 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
VIPAS39-210ENST00000557466 SETQ01105 290 aaPredicted RBP16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 NEDD9Q14511 834 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 KCNA10Q16322 511 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 PRR16Q569H4 304 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 MYSM1Q5VVJ2 828 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 SENP7Q9BQF6 1050 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 FOXP1Q9H334 677 aaPredicted RBP16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 C11orf49Q9H6J7 331 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 AGO4Q9HCK5 861 aaKnown RBP16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 BRCA2P51587 3418 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 SCN10AQ9Y5Y9 1956 aa16.88■□□□□ 0.29
VIPAS39-210ENST00000557466 H3BQV1 296 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 MAFGO15525 162 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 ASGR1P07306 291 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 MMP3P08254 477 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 CPT1AP50416 773 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 ACLYP53396 1101 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 ITGB3BPQ13352 177 aaPredicted RBP16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 LAMC2Q13753 1193 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 GNL2Q13823 731 aaKnown RBP16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 LETM2Q2VYF4 491 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 MOXD1Q6UVY6 613 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 CYFIP1Q7L576 1253 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 NECAB2Q7Z6G3 386 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 PCSK9Q8NBP7 692 aaKnown RBP16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 MBOAT7Q96N66 472 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 UIMC1Q96RL1 719 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 TELO2Q9Y4R8 837 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 WDR81Q562E7 1941 aa16.87■□□□□ 0.29
VIPAS39-210ENST00000557466 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 CYP3A7-CYP3A51PA0A087WV96 503 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 A0A1W2PQ45 241 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms