RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CPDO75976 1380 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 CCDC7Q96M83 1385 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 USP54Q70EL1 1684 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 LMO7Q8WWI1 1683 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 WASHC2AQ641Q2 1341 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 FADS2P1A8MWK0 482 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 ZNF205O95201 554 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 ACRP10323 421 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 ENDOUP21128 410 aaKnown RBP6.26□□□□□ -1.41
ATXN3-243ENST00000556671 HOXC9P31274 260 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 BMP8BP34820 402 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 CTSKP43235 329 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 FANCCQ00597 558 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 AUHQ13825 339 aaKnown RBP6.26□□□□□ -1.41
ATXN3-243ENST00000556671 HSP90AB2PQ58FF8 381 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 PLCD4Q9BRC7 762 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 BACH2Q9BYV9 841 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 METTL5Q9NRN9 209 aaKnown RBP6.26□□□□□ -1.41
ATXN3-243ENST00000556671 SUCOQ9UBS9 1254 aaKnown RBP6.26□□□□□ -1.41
ATXN3-243ENST00000556671 FBXL21Q9UKT6 434 aa6.26□□□□□ -1.41
ATXN3-243ENST00000556671 CRB1P82279 1406 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 NFAT5O94916 1531 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 MEIS1O00470 390 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 IMPDH2P12268 514 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 PNLIPP16233 465 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 RTP1P59025 263 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 USP48Q86UV5 1035 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 TAB3Q8N5C8 712 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-243ENST00000556671 DHRS1Q96LJ7 313 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 SGPP1Q9BX95 441 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 ERVK13-1Q9NX77 482 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 RAPGEFL1Q9UHV5 662 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
ATXN3-243ENST00000556671 COL5A2P05997 1499 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-243ENST00000556671 FAM208AQ9UK61 1670 aaKnown RBP6.25□□□□□ -1.41
ATXN3-243ENST00000556671 PEAK1Q9H792 1746 aa6.25□□□□□ -1.41
ATXN3-243ENST00000556671 CDK12Q9NYV4 1490 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-243ENST00000556671 C9IYK1 514 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 SHOXO15266 292 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 IL2RBP14784 551 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 HSF5Q4G112 596 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-243ENST00000556671 ZNF394Q53GI3 561 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 GALNT18Q6P9A2 607 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 C7orf61Q8IZ16 206 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 IRF2BPLQ9H1B7 796 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 POLKQ9UBT6 870 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 MBD1Q9UIS9 605 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-243ENST00000556671 GPR55Q9Y2T6 319 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-243ENST00000556671 ITGB4P16144 1822 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 RGPD1P0DJD0 1748 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 PARP4Q9UKK3 1724 aaKnown RBP6.24□□□□□ -1.41
ATXN3-243ENST00000556671 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
ATXN3-243ENST00000556671 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
ATXN3-243ENST00000556671 WTIPA6NIX2 430 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 VAV1P15498 845 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 MTHFSP49914 203 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 PMS1P54277 932 aaKnown RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 YBX1P67809 324 aaKnown RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 SRSF3P84103 164 aaKnown RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 KIR3DS1Q14943 382 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 CRTC3Q6UUV7 619 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 DEFB132Q7Z7B7 95 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 SLCO6A1Q86UG4 719 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 ZCRB1Q8TBF4 217 aaKnown RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 TM9SF2Q99805 663 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 CDADC1Q9BWV3 514 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 CNOT6Q9ULM6 557 aaKnown RBP6.23□□□□□ -1.41
ATXN3-243ENST00000556671 PCDHGB7Q9Y5F8 929 aa6.23□□□□□ -1.41
ATXN3-243ENST00000556671 FAM86C2PA6NEL3 165 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
ATXN3-243ENST00000556671 GSNP06396 782 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 VIPR1P32241 457 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 CCDC144CPQ8IYA2 1237 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 MARCH10Q8NA82 808 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-243ENST00000556671 RBBP8NLQ8NC74 664 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-243ENST00000556671 SMARCC1Q92922 1105 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-243ENST00000556671 FERD3LQ96RJ6 166 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 KCTD3Q9Y597 815 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 TAF6LQ9Y6J9 622 aa6.22□□□□□ -1.41
ATXN3-243ENST00000556671 BLMP54132 1417 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-243ENST00000556671 FLT4P35916 1363 aa6.21□□□□□ -1.41
ATXN3-243ENST00000556671 THSD7AQ9UPZ6 1657 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 A0A1W2PQ45 241 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-243ENST00000556671 A0A1W2PQY0 241 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 INHBBP09529 407 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 SDHBP21912 280 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 RACK1P63244 317 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms