RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PAXBP1Q9Y5B6 917 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 NUP98P52948 1817 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 WDR19Q8NEZ3 1342 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 SH3TC1Q8TE82 1336 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 KIF13BQ9NQT8 1826 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 ANKRD33BA6NCL7 494 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 FIBPO43427 364 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 ADCY5O95622 1261 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 MAPK8P45983 427 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 NOLC1Q14978 699 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 TTF1Q15361 905 aaPredicted RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 TNNI3KQ59H18 835 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 SLC10A5Q5PT55 438 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 EXOSC6Q5RKV6 272 aaKnown RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 C9orf131Q5VYM1 1079 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 TSHZ3Q63HK5 1081 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 NOL8Q76FK4 1167 aaKnown RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 NPAS4Q8IUM7 802 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 JMYQ8N9B5 988 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 KBTBD3Q8NAB2 608 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 SMG8Q8ND04 991 aaKnown RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 C3orf58Q8NDZ4 430 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 RPGRQ92834 1020 aaKnown RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 ZNF274Q96GC6 653 aaPredicted RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 RBM17Q96I25 401 aaKnown RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 MYD88Q99836 296 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 OSBPL7Q9BZF2 842 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 TMX4Q9H1E5 349 aaPredicted RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 CWC25Q9NXE8 425 aaPredicted RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 HOOK1Q9UJC3 728 aaKnown RBP7.07□□□□□ -1.28
CPSF2-205ENST00000556622 FPGT-TNNI3KV9GXZ4 949 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 MED23Q9ULK4 1368 aa7.07□□□□□ -1.28
CPSF2-205ENST00000556622 UBN2Q6ZU65 1347 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 LAMB4A4D0S4 1761 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 WDR64B1ANS9 1081 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 TAF5LO75529 589 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 SASH1O94885 1247 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 NTSR2O95665 410 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 MAP4K4O95819 1239 aaPredicted RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 DLGAP3O95886 979 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 CYP11A1P05108 521 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 HCLS1P14317 486 aaPredicted RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 GSDMDP57764 484 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 FAAP100Q0VG06 881 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 TRDNQ13061 729 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 SYCP1Q15431 976 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 IMMTQ16891 758 aaKnown RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 GORABQ5T7V8 394 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 SOGA3Q5TF21 947 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 ANKRD34AQ69YU3 496 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 FAM20CQ8IXL6 584 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 SYNE4Q8N205 404 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 RNF214Q8ND24 703 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 BICD2Q8TD16 824 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 ZNF526Q8TF50 670 aaPredicted RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 GTF3C6Q969F1 213 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 EAF2Q96CJ1 260 aaPredicted RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 FAM89AQ96GI7 184 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 ISCA1Q9BUE6 129 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 BOLA2Q9H3K6 86 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 ANO10Q9NW15 660 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 RNF181Q9P0P0 153 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 CNPY2Q9Y2B0 182 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 R3HCC1Q9Y3T6 440 aaKnown RBP7.06□□□□□ -1.28
CPSF2-205ENST00000556622 SPEF2Q9C093 1822 aa7.06□□□□□ -1.28
CPSF2-205ENST00000556622 UQCRHLA0A096LP55 91 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 BECN2A8MW95 431 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 PFKFB2O60825 505 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 KINO60870 393 aaKnown RBP7.05□□□□□ -1.28
CPSF2-205ENST00000556622 TIAF1O95411 115 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 LDHBP07195 334 aaKnown RBP7.05□□□□□ -1.28
CPSF2-205ENST00000556622 UQCRHP07919 91 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
CPSF2-205ENST00000556622 NLRP12P59046 1061 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 ATP2B2Q01814 1243 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 GSTM4Q03013 218 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 ME3Q16798 604 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC57Q2TAC2 916 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 CWF19L2Q2TBE0 894 aaKnown RBP7.05□□□□□ -1.28
CPSF2-205ENST00000556622 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
CPSF2-205ENST00000556622 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 HOMEZQ8IX15 550 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 RTKN2Q8IZC4 609 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 MYRIPQ8NFW9 859 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 KCNG4Q8TDN1 519 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 WASF1Q92558 559 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 JARID2Q92833 1246 aaPredicted RBP7.05□□□□□ -1.28
CPSF2-205ENST00000556622 CRAMP1Q96RY5 1269 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 FAM83CQ9BQN1 747 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 RUSC1Q9BVN2 902 aa7.05□□□□□ -1.28
CPSF2-205ENST00000556622 CLSTN2Q9H4D0 955 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms