RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 KRT15P19012 456 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 COL9A3Q14050 684 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 KCNB1Q14721 858 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 WDR44Q5JSH3 913 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 MAGOHBQ96A72 148 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 AGPAT5Q9NUQ2 364 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 PSMD14O00487 310 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 HHATQ5VTY9 493 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 TCP11Q8WWU5 503 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 CEP72Q9P209 647 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 ODF2LQ9ULJ1 636 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 NEBLO76041 1014 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 ZNF131P52739 623 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 ANKRD40Q6AI12 368 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 H3BQF6 201 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 RPSAP08865 295 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 FCER1AP12319 257 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 VPS41P49754 854 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 ASPRV1Q53RT3 343 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 RNF10Q8N5U6 811 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 CNOT10Q9H9A5 744 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 SMTNP53814 917 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 TCP10Q12799 353 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 NEDD9Q14511 834 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 TCHPQ9BT92 498 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 GFPT2O94808 682 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 SRGNP10124 158 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 ERVK-24P63145 666 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 SEPT2Q15019 361 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 FAM178BQ8IXR5 827 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 PTPN22Q9Y2R2 807 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 PCDHA1Q9Y5I3 950 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 FRMD3A2A2Y4 597 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 GTF2IP78347 998 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 MSANTD4Q8NCY6 345 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 MAIP1Q8WWC4 291 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 ARHGEF2Q92974 986 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 FMO2Q99518 471 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 DCP1AQ9NPI6 582 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 USP40Q9NVE5 1235 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 L1RE1Q9UN81 338 aa16.4■□□□□ 0.22
ARHGEF40-207ENST00000556399 CSF1RP07333 972 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 TSNAXIP1Q2TAA8 658 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 GCNT4Q9P109 453 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 TFR2Q9UP52 801 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 POTEMA6NI47 508 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 CLIC2O15247 247 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 GAS7O60861 476 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 PLA2G4BP0C869 781 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 EXOC7Q9UPT5 735 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 CEP83Q9Y592 693 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
ARHGEF40-207ENST00000556399 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 HOXA7P31268 230 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 ADCY8P40145 1251 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 MESDQ14696 234 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 UBE2SQ16763 222 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 FAM83BQ5T0W9 1011 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 PVALEFA0A1B0GWK0 134 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 THAP12O43422 761 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 CCDC13Q8IYE1 715 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 RABGAP1Q9Y3P9 1069 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 SASH3O75995 380 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 SUN1O94901 812 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 PRDX5P30044 214 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 HIBCHQ6NVY1 386 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 NEK9Q8TD19 979 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 PACSIN2Q9UNF0 486 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 CCDC188H7C350 402 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 RUNDC3BQ96NL0 473 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 PPP1R12CQ9BZL4 782 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 DIP2BQ9P265 1576 aa16.38■□□□□ 0.21
ARHGEF40-207ENST00000556399 HIP1RO75146 1068 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 SLCO1A2P46721 670 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 NLRP14Q86W24 1093 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms