RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 MTFR1LQ9H019 292 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 KBTBD4Q9NVX7 518 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 FBXL21Q9UKT6 434 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 PIK3C2AO00443 1686 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 SBNO2Q9Y2G9 1366 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 MAP3K19Q56UN5 1328 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 A0A1W2PQ27 194 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 A0A1W2PQ64 194 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 A0A1W2PQC6 194 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 A0A1W2PQD8 194 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 TMEM82A0PJX8 343 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 WTIPA6NIX2 430 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-240ENST00000556339 FYB1O15117 783 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 SIGLEC6O43699 453 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 POLR2BP30876 1174 aaKnown RBP5.29□□□□□ -1.56
ATXN3-240ENST00000556339 RAB3GAP1Q15042 981 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 VMACQ2NL98 169 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 NBPF9Q3BBW0 867 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 NBPF12Q5TAG4 269 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-240ENST00000556339 NBPF6Q5VWK0 638 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 OVOS1Q6IE37 1185 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 TMC6Q7Z403 805 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 VWCEQ96DN2 955 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 NBPF4Q96M43 638 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 TESK2Q96S53 571 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 SYT17Q9BSW7 474 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 CNTD2Q9H8S5 307 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 BRMS1Q9HCU9 246 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 CHST7Q9NS84 486 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 RTEL1Q9NZ71 1219 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 TNFRSF10DQ9UBN6 386 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 CCNL1Q9UK58 526 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-240ENST00000556339 GPR55Q9Y2T6 319 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-240ENST00000556339 ZNF281Q9Y2X9 895 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 SUPT16HQ9Y5B9 1047 aaKnown RBP5.29□□□□□ -1.56
ATXN3-240ENST00000556339 A0A1W2PP64 1363 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 NINLQ9Y2I6 1382 aa5.29□□□□□ -1.56
ATXN3-240ENST00000556339 OTOL1A6NHN0 477 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-240ENST00000556339 NUDT19A8MXV4 375 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 EFEMP2O95967 443 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 PRKCAP17252 672 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 TNNT2P45379 298 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-240ENST00000556339 BBS9Q3SYG4 887 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 HSF5Q4G112 596 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-240ENST00000556339 HSP90AB2PQ58FF8 381 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 NUP43Q8NFH3 380 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 FEZF2Q8TBJ5 459 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 MZB1Q8WU39 189 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 DACT3Q96B18 629 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-240ENST00000556339 PLCD4Q9BRC7 762 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 NUP188Q5SRE5 1749 aa5.28□□□□□ -1.56
ATXN3-240ENST00000556339 LTN1O94822 1766 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 BCL9O00512 1426 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 CELA3BP08861 270 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 MCM4P33991 863 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 CDR1P51861 262 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 ERVFRD-1P60508 538 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 CYP4F8P98187 520 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 LAPTM5Q13571 262 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 ZNF827Q17R98 1081 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 TNS2Q63HR2 1409 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 FBXL19Q6PCT2 694 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 NLRC3Q7RTR2 1065 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 PRRT2Q7Z6L0 340 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-240ENST00000556339 SMG6Q86US8 1419 aaKnown RBP5.27□□□□□ -1.57
ATXN3-240ENST00000556339 NAT16Q8N8M0 369 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 PRDM14Q9GZV8 571 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 GFOD1Q9NXC2 390 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 MINPP1Q9UNW1 487 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 PCDHB12Q9Y5F1 795 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 RREB1Q92766 1687 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 NFAT5O94916 1531 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 USP47Q96K76 1375 aa5.27□□□□□ -1.57
ATXN3-240ENST00000556339 LRRC37A3O60309 1634 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 CGNL1Q0VF96 1302 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 MON2Q7Z3U7 1717 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 A0A1W2PQJ5 194 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 EIF4A3P38919 411 aaKnown RBP5.26□□□□□ -1.57
ATXN3-240ENST00000556339 YBX1P67809 324 aaKnown RBP5.26□□□□□ -1.57
ATXN3-240ENST00000556339 SEZ6Q53EL9 994 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 DBX2Q6ZNG2 339 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 GK5Q6ZS86 529 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 CXorf38Q8TB03 319 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 SMARCC1Q92922 1105 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-240ENST00000556339 PWWP2AQ96N64 755 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 DSCC1Q9BVC3 393 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 BCL11AQ9H165 835 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 XYLT2Q9H1B5 865 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 ANKRD36BQ8N2N9 1353 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 CD163L1Q9NR16 1453 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 PEAK1Q9H792 1746 aa5.26□□□□□ -1.57
ATXN3-240ENST00000556339 CHD4Q14839 1912 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 FADS2P1A8MWK0 482 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 GARTP22102 1010 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 CCNFP41002 786 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 NCKAP1LP55160 1127 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 KIR3DS1Q14943 382 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 CDCP2Q5VXM1 449 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms