RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ZDHHC1Q8WTX9 485 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 NEUROD6Q96NK8 337 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 TINF2Q9BSI4 451 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 CABP5Q9NP86 173 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 NOP53Q9NZM5 478 aaKnown RBP8.37□□□□□ -1.07
ATXN3-236ENST00000556220 DIS3Q9Y2L1 958 aaKnown RBP8.37□□□□□ -1.07
ATXN3-236ENST00000556220 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 REV3LO60673 3130 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 BRWD1Q9NSI6 2320 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 ARVCFO00192 962 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 EML1O00423 815 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 SLC25A27O95847 323 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 CYP2C18P33260 490 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 GUCY1A2P33402 732 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 MCAMP43121 646 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 RABGGTBP53611 331 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 PLS1Q14651 629 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 ABCB5Q2M3G0 1257 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 ZNF792Q3KQV3 632 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 GORABQ5T7V8 394 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 OTOP2Q7RTS6 562 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 ADGRA1Q86SQ6 560 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 FCHSD1Q86WN1 690 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 SLC9A9Q8IVB4 645 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 LENG1Q96BZ8 264 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-236ENST00000556220 GLT1D1Q96MS3 346 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 PPP1R12CQ9BZL4 782 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 SUV39H2Q9H5I1 410 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
ATXN3-236ENST00000556220 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 PLXNA1Q9UIW2 1896 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 A0A0U1RQG5 324 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-236ENST00000556220 A0A1W2PRG0 241 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 SERTM1A2A2V5 107 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 PRR33A8MZF0 331 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 RFXAPO00287 272 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 CD4P01730 458 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 PGK2P07205 417 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 MYOGP15173 224 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 CST5P28325 142 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-236ENST00000556220 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 PCSK9Q8NBP7 692 aaKnown RBP8.35□□□□□ -1.07
ATXN3-236ENST00000556220 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 MMP19Q99542 508 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 TANGO6Q9C0B7 1094 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 EHD4Q9H223 541 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 CD320Q9NPF0 282 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 SERPINB13Q9UIV8 391 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 ZNF232Q9UNY5 417 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 CNPY2Q9Y2B0 182 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 SLC4A7Q9Y6M7 1214 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-236ENST00000556220 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
ATXN3-236ENST00000556220 SYNRGQ9UMZ2 1314 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 PTPRZ1P23471 2315 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-236ENST00000556220 MYADML2A6NDP7 307 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 POM121CA8CG34 1229 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 TLR3O15455 904 aaKnown RBP8.34□□□□□ -1.07
ATXN3-236ENST00000556220 IGSF3O75054 1194 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 DUSP11O75319 330 aaKnown RBP8.34□□□□□ -1.07
ATXN3-236ENST00000556220 ASGR1P07306 291 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 SHMT1P34896 483 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 DYNLL1P63167 89 aaKnown RBP8.34□□□□□ -1.07
ATXN3-236ENST00000556220 NHLH1Q02575 133 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 KCTD2Q14681 263 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 TMEM132BQ14DG7 1078 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 SEPT2Q15019 361 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 TTC6Q86TZ1 520 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 RPUSD2Q8IZ73 545 aaKnown RBP8.34□□□□□ -1.07
ATXN3-236ENST00000556220 MSL3Q8N5Y2 521 aaKnown RBP8.34□□□□□ -1.07
ATXN3-236ENST00000556220 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
ATXN3-236ENST00000556220 CACNA1AO00555 2505 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 EPOPA6NHQ4 379 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 M0R2N6 131 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 ATP9BO43861 1147 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 FLOT1O75955 427 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 ATP2A2P16615 1042 aaKnown RBP8.33□□□□□ -1.08
ATXN3-236ENST00000556220 PLCD1P51178 756 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 PCBP4P57723 403 aaKnown RBP8.33□□□□□ -1.08
ATXN3-236ENST00000556220 TMEM67Q5HYA8 995 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 KIAA1755Q5JYT7 1200 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 KRT40Q6A162 431 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 LRRC69Q6ZNQ3 347 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 TPCN2Q8NHX9 752 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 KCNH6Q9H252 994 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 SPC25Q9HBM1 224 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 ADAMTS5Q9UNA0 930 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 SIPA1L1O43166 1804 aa8.33□□□□□ -1.08
ATXN3-236ENST00000556220 ZDBF2Q9HCK1 2354 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 SRGAP3O43295 1099 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 SNAI1O95863 264 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-236ENST00000556220 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-236ENST00000556220 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms